Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_G04
(878 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 85 2e-15
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 81 5e-14
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 62 2e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 1e-06
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 56 1e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 53 8e-06
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 43 0.009
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.036
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 41 0.048
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 37 0.78
UniRef50_Q09CP7 Cluster: TonB protein; n=2; Cystobacterineae|Rep... 36 1.4
UniRef50_UPI00015B41EB Cluster: PREDICTED: similar to glycine ri... 35 2.4
UniRef50_A2ELB8 Cluster: DNA-directed RNA polymerase II largest ... 35 2.4
UniRef50_A0NCE8 Cluster: ENSANGP00000031881; n=1; Anopheles gamb... 35 2.4
UniRef50_Q9XDH2 Cluster: Proline-rich mucin homolog; n=2; Mycoba... 34 4.1
UniRef50_Q9VVG2 Cluster: CG13731-PA; n=1; Drosophila melanogaste... 34 4.1
UniRef50_A5UWH9 Cluster: Putative uncharacterized protein; n=2; ... 34 5.5
UniRef50_A5DXS1 Cluster: Predicted protein; n=7; Lodderomyces el... 34 5.5
UniRef50_Q123S7 Cluster: Putative prolin-rich exported protein p... 33 7.2
UniRef50_A5EB51 Cluster: Putative uncharacterized protein; n=2; ... 33 7.2
UniRef50_A0VF81 Cluster: Putative uncharacterized protein; n=4; ... 33 9.6
UniRef50_Q0J0J6 Cluster: Os09g0497100 protein; n=3; Oryza sativa... 33 9.6
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 85.4 bits (202), Expect = 2e-15
Identities = 56/117 (47%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Frame = +3
Query: 522 FPXAPPPLTSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVPTLPLYRIP--VPXFL 695
F PLTSITK + + + K RFPLEAP S R+P P F
Sbjct: 16 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP---SCALLFRPCRLPDTCPPF- 71
Query: 696 PFGKAWPFLIAHAVXISVRXXGRSPPSWAVCTNPPFXPTAAPYPGNYRLESXRVXTT 866
+AW FLIAHAV ISVR +P SWAVCTNPPF PTAAPYP L R TT
Sbjct: 72 SLREAWRFLIAHAVGISVRCRSFAP-SWAVCTNPPFSPTAAPYPVTIVLSPTRKDTT 127
Score = 69.3 bits (162), Expect = 1e-10
Identities = 39/72 (54%), Positives = 41/72 (56%)
Frame = +2
Query: 479 SKRPGTVKRPRCWRFSIXSAPPDEHHKIDAQVRGGETRQDYKDTXXFPPGSSPXALSCSD 658
SK+ T R RFSI SAP KIDAQVRGGETRQDYKDT FP +P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL-EAPSCALLFR 60
Query: 659 PAALPDTCSXLS 694
P LPDTC S
Sbjct: 61 PCRLPDTCPPFS 72
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 80.6 bits (190), Expect = 5e-14
Identities = 46/79 (58%), Positives = 52/79 (65%)
Frame = -1
Query: 818 RSGRXERGVRAHSPAWRGTTXXPN*DTYSVSYEKGPRFPEXEKGRNRYPVKRQGRNRRAX 639
RS R ERGVRA+SPAW P+ DT SVSYEK PRFP+ +K + KRQGRNRRA
Sbjct: 20 RSSRAERGVRAYSPAW-SERPKPSRDTSSVSYEKAPRFPKGKKA-EQVSGKRQGRNRRAH 77
Query: 638 EGSFQGETXWYLYSPVGFR 582
EG+ GE SPVGFR
Sbjct: 78 EGA-AGEKSPASLSPVGFR 95
Score = 34.7 bits (76), Expect = 3.1
Identities = 28/95 (29%), Positives = 36/95 (37%)
Frame = -3
Query: 855 PGWTQDDSYPDKAQRSG*TGGSCTQPSLEGNDXTXXXXXXXXXXXXRATLSRXGERXEQV 676
PGWTQDDSY G P+ ++ +A G++ EQV
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPA--WSERPKPSRDTSSVSYEKAPRFPKGKKAEQV 65
Query: 675 SGKAAGSEQESAXGELPGGNXXVSL*SCRVSPPLT 571
SGK G + + G G SL PPLT
Sbjct: 66 SGKRQGRNRRAHEG-AAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 62.1 bits (144), Expect = 2e-08
Identities = 37/56 (66%), Positives = 38/56 (67%)
Frame = -3
Query: 540 GAEXMEKRQQRGLFTVPGLLLAFCSHVLSCVYPLILWITVLPPLSELIPLAAAERP 373
GAE MEKR + L V LL CS L YPLILWITVLPPLSEL PLAA ERP
Sbjct: 5 GAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/55 (56%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 286 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGI 447
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGM 320
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +2
Query: 497 VKRPRCWRFSIXSAPPDEHHKIDAQVRGGETRQDYKDTXXFPPGSSPXAL 646
V+ PR RFSI SAP K DAQ+ GGETRQDYKDT FP + AL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCAL 93
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 53.2 bits (122), Expect = 8e-06
Identities = 30/65 (46%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 672 RIPVPXFLPFGKAWPFLIAHAVXISVRXXGRS-PPSWAVCTNPPFXPTAAPYPGNYRLES 848
RIPVP PF A ++H+ + RS PSWAV NPPF PTAAPYP L
Sbjct: 55 RIPVP---PFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAPYPVTVHLSP 111
Query: 849 XRVXT 863
R T
Sbjct: 112 TRKST 116
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 310 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 408
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
Score = 52.8 bits (121), Expect = 1e-05
Identities = 26/40 (65%), Positives = 27/40 (67%)
Frame = +2
Query: 503 RPRCWRFSIXSAPPDEHHKIDAQVRGGETRQDYKDTXXFP 622
RPR RFSI SAP K DAQ+ GGETRQDYKD FP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFP 117
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 88 DPDMIRYIDEFGQTTTRMQ 144
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 43.2 bits (97), Expect = 0.009
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = -1
Query: 875 VGISRXYPXGLKTIVTRIRRSGRXERGVRAHSPAW 771
+ + R P + RIRRSGR ERGVRAHSPAW
Sbjct: 1 MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAW 35
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.1 bits (92), Expect = 0.036
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 212 INKLTTTIAFILCFRFRGEVWEVFSALMNRPTRGERRFAYW 334
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 40.7 bits (91), Expect = 0.048
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 785 VHEPPVXPDRCALSG*LSS*VXPGKXDLSPL 877
+HEPPV PDRCALSG P + DLSPL
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPL 31
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 356 ERGSGRAPNTQTASPRALADSLMQ 285
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 36.7 bits (81), Expect = 0.78
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -1
Query: 863 RXYPXGLKTIVTRIRRSGRXERGVRAHSPAW 771
R +P + RIRRS R ERGV A+SPAW
Sbjct: 5 RAFPGWTQVNSYRIRRSSRAERGVLAYSPAW 35
>UniRef50_Q09CP7 Cluster: TonB protein; n=2; Cystobacterineae|Rep:
TonB protein - Stigmatella aurantiaca DW4/3-1
Length = 250
Score = 35.9 bits (79), Expect = 1.4
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +3
Query: 525 PXAPPPLTSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVPTLP 665
P PPP S K+T K V KPD ++ P P E P + PV P
Sbjct: 65 PPPPPPAASKPKTTPKKPVKKPDVIVQ-PKEIPQEKPPEQEPVEEPP 110
>UniRef50_UPI00015B41EB Cluster: PREDICTED: similar to glycine rich
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to glycine rich protein - Nasonia vitripennis
Length = 323
Score = 35.1 bits (77), Expect = 2.4
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +3
Query: 648 PVPTLPLYRIPVPXFLPFGKAWPFLIAHAVXISVRXXGRSP---PSWAVCTNPPFXPTAA 818
PVP + PVP +P+ +A+P + HAV I V+ P P +P P A
Sbjct: 139 PVPIEKIIHKPVPIAVPYPQAYPVPVEHAVPIPVKHPVAVPVHQPYPVPIKHPVPYPVAV 198
Query: 819 PYP 827
P P
Sbjct: 199 PIP 201
>UniRef50_A2ELB8 Cluster: DNA-directed RNA polymerase II largest
subunit-related protein; n=6; root|Rep: DNA-directed RNA
polymerase II largest subunit-related protein -
Trichomonas vaginalis G3
Length = 528
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 540 PLTSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVPTLPLYRIPVP 686
P S T+S +S P + P R P +P ++P P P R P P
Sbjct: 365 PTRSPTRSPTRSPTRSPTVPTRSPTRSPTRSPTPKTPTPKTPTPRTPTP 413
>UniRef50_A0NCE8 Cluster: ENSANGP00000031881; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000031881 - Anopheles gambiae
str. PEST
Length = 186
Score = 35.1 bits (77), Expect = 2.4
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 468 SKRPAKGQEP*KGRVAGVFPXAPPPLTSITKSTLKSEVAKPD-RTIKIPXRFPLEAPLXR 644
+K+PA QEP V P P P++ TK SE P + IP F +A +
Sbjct: 44 AKQPA-AQEP--SSVKAKVPTVPEPVSPNTKQPTVSEPTSPKAKQATIPEPFLPKAKVPT 100
Query: 645 SPVPTLPLYRIP 680
+P PT P +IP
Sbjct: 101 APEPTSPKAKIP 112
>UniRef50_Q9XDH2 Cluster: Proline-rich mucin homolog; n=2;
Mycobacterium tuberculosis|Rep: Proline-rich mucin
homolog - Mycobacterium tuberculosis
Length = 763
Score = 34.3 bits (75), Expect = 4.1
Identities = 33/104 (31%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +3
Query: 525 PXAPP-PLTSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVPTLPLYRIP-VPXFLP 698
P APP P T + L PD K P P+ +PVP P+ +P VP +P
Sbjct: 206 PPAPPMPATPMEFPPLPP--VPPDPISKETPPAPPAPPIPPAPVPIPPVPPLPPVPNKIP 263
Query: 699 FGKAWPFLIAHAVXISVRXXGRSPPSWAVCTNPPFXPTAAPYPG 830
P + AV ++ PP + N P P AAP PG
Sbjct: 264 PAPPAPPVAVAAVLVAP-----CPPLPPLPNNHPPAPPAAPVPG 302
>UniRef50_Q9VVG2 Cluster: CG13731-PA; n=1; Drosophila
melanogaster|Rep: CG13731-PA - Drosophila melanogaster
(Fruit fly)
Length = 926
Score = 34.3 bits (75), Expect = 4.1
Identities = 27/98 (27%), Positives = 37/98 (37%)
Frame = +3
Query: 534 PPPLTSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVPTLPLYRIPVPXFLPFGKAW 713
PP + T+++ V R P + P P P PT+ R P P P K
Sbjct: 483 PPTNKPLPPVTVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKP- 541
Query: 714 PFLIAHAVXISVRXXGRSPPSWAVCTNPPFXPTAAPYP 827
P + ++VR +PP T PP P P P
Sbjct: 542 P--TTYLPPVTVRTTRATPPPTRPPTRPPTPPPTRPPP 577
>UniRef50_A5UWH9 Cluster: Putative uncharacterized protein; n=2;
Roseiflexus|Rep: Putative uncharacterized protein -
Roseiflexus sp. RS-1
Length = 543
Score = 33.9 bits (74), Expect = 5.5
Identities = 37/147 (25%), Positives = 50/147 (34%), Gaps = 5/147 (3%)
Frame = +3
Query: 417 VIRLSTESGDKRRKEHVSKRPAKGQEP*KGRVAGVFPXAPPPLTSITKSTLKSEVAKPDR 596
V+ T G E + +P A P P PL + T S S P+
Sbjct: 134 VVASPTSGGAVGALETATATEGASPQPTPSATATAVPPTPTPLPTSTPSPQPSPTPTPEP 193
Query: 597 TIKIPXRFPLEAPLXRS--PVPTLPLYRIPVPXFL--PFGKAWPFLIAHAVXISVRXXGR 764
I +P P + + P PTL ++PV + P A +
Sbjct: 194 VILVPTALPTQPTGGATIVPSPTLQPTQLPVTPGVTATVQPTQPTATPTATIMPPTAVPT 253
Query: 765 SPPSWAVCTNPPFXP-TAAPYPGNYRL 842
+PPS T PP P AP N RL
Sbjct: 254 TPPSPPPPTAPPATPRPPAPTVRNERL 280
>UniRef50_A5DXS1 Cluster: Predicted protein; n=7; Lodderomyces
elongisporus NRRL YB-4239|Rep: Predicted protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 469
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 480 AKGQEP*KGRVAGVFPXAP-PPLTSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVP 656
+KG++P + +V P P P T LKS +AK + + P + P APL +PV
Sbjct: 14 SKGEKPAERKVRFQLPGEPVPQSTKQVFQNLKSTLAKGFKPSQTPGKSPSGAPLLETPVK 73
Query: 657 TL 662
L
Sbjct: 74 KL 75
>UniRef50_Q123S7 Cluster: Putative prolin-rich exported protein
precursor; n=2; Comamonadaceae|Rep: Putative prolin-rich
exported protein precursor - Polaromonas sp. (strain
JS666 / ATCC BAA-500)
Length = 769
Score = 33.5 bits (73), Expect = 7.2
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +3
Query: 477 PAKGQEP*KGRVAGVFPXAPPPLTSITKSTLKSEVAKPDRTIKIPXR---FPLEAP--LX 641
P + + P G P AP P+ + +T +E A+P R I R P++ P L
Sbjct: 641 PQRPEVPRPGSPPAAAPAAPVPVAPVPDATKPAEEARPSRPPAIAPRNVPAPVQRPAELK 700
Query: 642 RSPVPTLPLYRIPVPXFLP 698
PVP P R P P
Sbjct: 701 PEPVPVPPAPRASGPVAAP 719
>UniRef50_A5EB51 Cluster: Putative uncharacterized protein; n=2;
Bradyrhizobium|Rep: Putative uncharacterized protein -
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 97
Score = 33.5 bits (73), Expect = 7.2
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 696 PFGKAWPFLIAHAVXISVRXXGRSPPSWAVCTNPPFXP-TAAP 821
P KAWP L+A A +S+ GR P +PP +AAP
Sbjct: 12 PMSKAWPLLVAGAAALSLAACGRKGPLDLPANSPPAPQMSAAP 54
>UniRef50_A0VF81 Cluster: Putative uncharacterized protein; n=4;
Proteobacteria|Rep: Putative uncharacterized protein -
Delftia acidovorans SPH-1
Length = 1679
Score = 33.1 bits (72), Expect = 9.6
Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 10/118 (8%)
Frame = +3
Query: 525 PXAPPPLTSITKSTLKSEV-AKPDRTIKIPXRFPLEAPLXRSPVPTLPLYRI--PV---- 683
P + PP ++ +T+ S +P+ + P P+ P PT P R PV
Sbjct: 191 PPSSPPTMPLSPTTVSSRPPTRPEPPPRPPVSPPVRPPSRPPSPPTTPPSRPSPPVRPAS 250
Query: 684 -PXFLPFG--KAWPFLIAHAVXISVRXXGRSPPSWAVCTNPPFXPTAAPYPGNYRLES 848
P +P AWP + SV P +W + P AP PG+ S
Sbjct: 251 TPLTVPITGCSAWPGTCVRPLARSVTTPSGPPLTWVTPSTRPVTTDRAPVPGSISASS 308
>UniRef50_Q0J0J6 Cluster: Os09g0497100 protein; n=3; Oryza
sativa|Rep: Os09g0497100 protein - Oryza sativa subsp.
japonica (Rice)
Length = 988
Score = 33.1 bits (72), Expect = 9.6
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 539 PPDEHHKIDAQVRGGETRQDYKDTXXFPPGSSPXALSCSDPAALPDTCSXLSP 697
PPD H + +R T K T P SSP SCSD + + + C +P
Sbjct: 261 PPDAHQRSPRPIR---TPVSTKLTSDSLPASSPPTSSCSDYSTITEACQQRNP 310
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,322,507
Number of Sequences: 1657284
Number of extensions: 15995614
Number of successful extensions: 43116
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 40738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43005
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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