BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G04 (878 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 31 1.3 At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 30 1.8 At4g00890.1 68417.m00120 proline-rich family protein contains pr... 29 3.1 At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 29 3.1 At1g24220.1 68414.m03054 paired amphipathic helix repeat-contain... 29 3.1 At5g45050.2 68418.m05524 disease resistance protein-related simi... 29 5.4 At5g45050.1 68418.m05523 disease resistance protein-related simi... 29 5.4 At3g20830.1 68416.m02634 protein kinase family protein contains ... 28 7.2 At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 9.5 >At3g19430.1 68416.m02464 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein [Picea glauca] GI:1350543 Length = 559 Score = 30.7 bits (66), Expect = 1.3 Identities = 17/56 (30%), Positives = 23/56 (41%) Frame = +3 Query: 519 VFPXAPPPLTSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVPTLPLYRIPVP 686 V P P P S+ T P T +P P +P +P P++P PVP Sbjct: 115 VSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVP 170 Score = 29.1 bits (62), Expect = 4.1 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = +3 Query: 513 AGVFPXAPPPLT-SITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVPTLPLYRIPV 683 A V P +PPP T S+ T P T +P P +P +P P++P PV Sbjct: 76 APVPPVSPPPPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPV 133 Score = 27.9 bits (59), Expect = 9.5 Identities = 16/55 (29%), Positives = 22/55 (40%) Frame = +3 Query: 519 VFPXAPPPLTSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVPTLPLYRIPV 683 V P P P S+ T P T +P P +P +P P++P PV Sbjct: 97 VSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPV 151 >At1g62440.1 68414.m07044 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 826 Score = 30.3 bits (65), Expect = 1.8 Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 2/103 (1%) Frame = +3 Query: 525 PXAPPPL--TSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVPTLPLYRIPVPXFLP 698 P PPP+ +T+S S V P T P P+ +SP P P+Y PV P Sbjct: 675 PPPPPPVYYPPVTQSPPPSPVYYPPVTQSPPPPPVYYLPVTQSPPPPSPVYYPPVAKSPP 734 Query: 699 FGKAWPFLIAHAVXISVRXXGRSPPSWAVCTNPPFXPTAAPYP 827 P + ++ PPS V +PP P +P P Sbjct: 735 -----PPSPVYYPPVT---QSPPPPSTPVEYHPPASPNQSPPP 769 >At4g00890.1 68417.m00120 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 431 Score = 29.5 bits (63), Expect = 3.1 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = +3 Query: 525 PXAPP-PLTSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXR---SPVPTLP 665 P PP P I+ S+LKS + P TI P P +PL + SP P+LP Sbjct: 283 PMPPPSPTAQISLSSLKSPIPSP-ATITAPPP-PFSSPLSQTTPSPKPSLP 331 >At3g28550.1 68416.m03565 proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 1018 Score = 29.5 bits (63), Expect = 3.1 Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 5/108 (4%) Frame = +3 Query: 519 VFPXAPPPLTSITKSTLKSEVAKPDRTIKIPXRFPLEAP--LXRSPVPTLPLYRIPVPXF 692 V+ PPP S + + P P + +P + +SP P P P + Sbjct: 543 VYSSPPPPYYSPSPKVVYKSPPPPYVYSSPPPPYYSPSPKVVYKSPPPPYVYSSPPPPYY 602 Query: 693 LPFGKAW---PFLIAHAVXISVRXXGRSPPSWAVCTNPPFXPTAAPYP 827 P K + P HA S + +SPP VC PP P +P P Sbjct: 603 SPSPKVYYKSPPSPYHAP--SPKVLYKSPPHPHVCVCPPPPPCYSPSP 648 >At1g24220.1 68414.m03054 paired amphipathic helix repeat-containing protein weak similarity to transcription co-repressor Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile PF02671: Paired amphipathic helix repeat Length = 744 Score = 29.5 bits (63), Expect = 3.1 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Frame = -3 Query: 444 PLILWITVLPPLSELIPLAAAERPXXXXXXXXXXXXXQYANRLSPRVGRFI--NAEKTSH 271 P+ L IT++PP + + A++P + N+L P+ R I AEK +H Sbjct: 264 PVKLKITIIPPKARRTIPSEADKPTHTDELN-------FMNKLPPKRRRTIPSEAEKPTH 316 Query: 270 TSPLNLKHKM 241 T LN +K+ Sbjct: 317 TDELNFMNKL 326 >At5g45050.2 68418.m05524 disease resistance protein-related similar to NL27 [Solanum tuberosum] GI:3947735; contains Pfam profiles PF03106: WRKY DNA -binding domain, PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat Length = 1344 Score = 28.7 bits (61), Expect = 5.4 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 Query: 343 PLPRSLTRCARSFGCGERYQLTQRR 417 P PRS RCA S GC R Q+ + R Sbjct: 1169 PYPRSYYRCASSKGCFARKQVERSR 1193 >At5g45050.1 68418.m05523 disease resistance protein-related similar to NL27 [Solanum tuberosum] GI:3947735; contains Pfam profiles PF03106: WRKY DNA -binding domain, PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat Length = 1372 Score = 28.7 bits (61), Expect = 5.4 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 Query: 343 PLPRSLTRCARSFGCGERYQLTQRR 417 P PRS RCA S GC R Q+ + R Sbjct: 1197 PYPRSYYRCASSKGCFARKQVERSR 1221 >At3g20830.1 68416.m02634 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 408 Score = 28.3 bits (60), Expect = 7.2 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -2 Query: 334 PIRKPPLPARWPIH*CRKNLPHL 266 P PP P R P H CRKN P + Sbjct: 384 PSSAPPSPLRSPPHVCRKNDPFI 406 >At1g26150.1 68414.m03192 protein kinase family protein similar to Pto kinase interactor 1 GI:3668069 from [Lycopersicon esculentum] Length = 760 Score = 27.9 bits (59), Expect = 9.5 Identities = 19/70 (27%), Positives = 27/70 (38%) Frame = +3 Query: 477 PAKGQEP*KGRVAGVFPXAPPPLTSITKSTLKSEVAKPDRTIKIPXRFPLEAPLXRSPVP 656 PA+ P + ++ P PP S+T + P P P EAP +PV Sbjct: 57 PAQSSPPPETPLSSPPPEPSPPSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAPPPANPVS 116 Query: 657 TLPLYRIPVP 686 + P P P Sbjct: 117 SPPPESSPPP 126 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,594,605 Number of Sequences: 28952 Number of extensions: 353163 Number of successful extensions: 953 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 885 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 950 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 2067932800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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