BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G02 (834 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase... 120 3e-28 SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 82 1e-16 SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 72 9e-14 SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 29 0.81 SPBC21C3.09c |||fumarylacetoacetate |Schizosaccharomyces pombe|c... 27 3.3 SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 27 4.3 SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 27 4.3 SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 27 4.3 SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 27 4.3 SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 26 5.7 SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 26 5.7 SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 26 5.7 SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 26 7.6 SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 26 7.6 SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 26 7.6 SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces pombe... 26 7.6 SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35 ... 26 7.6 >SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase Fkh1|Schizosaccharomyces pombe|chr 2|||Manual Length = 112 Score = 120 bits (288), Expect = 3e-28 Identities = 55/92 (59%), Positives = 67/92 (72%) Frame = +1 Query: 238 KHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTI 417 K GD +TMHYTGTL +G KFDSS DR PF IGVGQ+I+GWD+G+ M +GEK KLTI Sbjct: 18 KPGDRITMHYTGTLTNGKKFDSSVDRGSPFVCTIGVGQLIRGWDEGVPKMSLGEKAKLTI 77 Query: 418 PASLGYGERGAGNVIPPHATLHFEVELINIGD 513 GYG RG +IPP++TL F+VEL+ I D Sbjct: 78 TPDYGYGPRGFPGLIPPNSTLLFDVELLAIND 109 >SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomerase|Schizosaccharomyces pombe|chr 2|||Manual Length = 361 Score = 81.8 bits (193), Expect = 1e-16 Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 2/115 (1%) Frame = +1 Query: 169 AGPEVTELKTEVV--SVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIG 342 + P+ LK VV V G + +G + M Y G L++G FD + + +PF F +G Sbjct: 248 SSPKTRTLKGGVVVTDVKTGSGASATNGKKVEMRYIGKLENGKVFDKN-TKGKPFAFILG 306 Query: 343 VGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELINI 507 G+VI+GWD G+ M G +RK+TIPA + YG + IP ++TL FEV+L+ + Sbjct: 307 RGEVIRGWDVGVAGMQEGGERKITIPAPMAYGNQSIPG-IPKNSTLVFEVKLVRV 360 >SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |Schizosaccharomyces pombe|chr 1|||Manual Length = 362 Score = 72.1 bits (169), Expect = 9e-14 Identities = 39/110 (35%), Positives = 63/110 (57%) Frame = +1 Query: 178 EVTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVI 357 +V E V +G +K ++M Y G L +G FD + +PFTF +G+ +VI Sbjct: 254 QVLEGNVTVQDKVKGDGPAAKRKKRVSMRYIGRLTNGKVFDKNIT-GKPFTFNLGLEEVI 312 Query: 358 KGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELINI 507 KGWD G++ M VG +R + IPA++ YG + IP ++ L F+V+L+ + Sbjct: 313 KGWDVGIVGMQVGGERTIHIPAAMAYGSKRLPG-IPANSDLVFDVKLLAV 361 >SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1273 Score = 29.1 bits (62), Expect = 0.81 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = -1 Query: 486 EMQCSVGRNHVAGSALSVAQGCGNSQFTFLTNAHVKQALVPSL 358 ++ ++GR H+AG + GC Q +FL+ V ++ SL Sbjct: 996 QLSYNLGRLHIAGDYIFSCVGCRTLQRSFLSGLSVCTGIIDSL 1038 >SPBC21C3.09c |||fumarylacetoacetate |Schizosaccharomyces pombe|chr 2|||Manual Length = 221 Score = 27.1 bits (57), Expect = 3.3 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Frame = +1 Query: 439 ERGAGN-VIPPHATLHFEVEL 498 E G GN +IPP + H+EVEL Sbjct: 42 EPGHGNLIIPPDVSAHYEVEL 62 >SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr 2|||Manual Length = 312 Score = 26.6 bits (56), Expect = 4.3 Identities = 10/19 (52%), Positives = 10/19 (52%) Frame = +2 Query: 119 RRCAACLCWLPWPGPRSRV 175 R C C CWLP SRV Sbjct: 113 RMCGTCKCWLPDRSHHSRV 131 >SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces pombe|chr 2|||Manual Length = 987 Score = 26.6 bits (56), Expect = 4.3 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -1 Query: 771 LI*SSSCLGPENSSWLMKPFLSLSSWLEDFLNKFIVTFQHLLDVFAYFTT 622 L+ + S L P NSS++ PF L S + FLN ++ + F+Y T Sbjct: 177 LLQTESSLRP-NSSFVNSPFFPLPSSDDLFLNDRVINLFLFYEKFSYLFT 225 >SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 1687 Score = 26.6 bits (56), Expect = 4.3 Identities = 11/56 (19%), Positives = 30/56 (53%) Frame = -1 Query: 729 WLMKPFLSLSSWLEDFLNKFIVTFQHLLDVFAYFTTVGGNHLLLQIVAHFFAGEHV 562 + +P + + ++ +L + Q + D+F++ + +++ Q+V+ FFA E + Sbjct: 1112 YFCEPLECVETLVQIYLENNVECCQCIWDIFSFLSDSEPQYIVKQLVSSFFAREGI 1167 >SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 480 Score = 26.6 bits (56), Expect = 4.3 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +1 Query: 541 EIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIK 648 E D +KDN + EE +D ++ GG+++ D K Sbjct: 51 EADGEKDNGMDEEEQNDAQPSKIPWLPGGKINADEK 86 >SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein Mug36|Schizosaccharomyces pombe|chr 2|||Manual Length = 1646 Score = 26.2 bits (55), Expect = 5.7 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = +1 Query: 304 SYDRDQPFTFQIGVGQVIKGWDQGLL---DMCVGEKRKLTIPASLGYGERGAGNVIP 465 SY +QP T + G+ Q G QGLL +G R+ SLG + G +P Sbjct: 1549 SYYAEQPETIEQGLRQGYSGLKQGLLGAKSTLMGLPRETRSHKSLGGVAQTVGRKVP 1605 >SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|Schizosaccharomyces pombe|chr 1|||Manual Length = 590 Score = 26.2 bits (55), Expect = 5.7 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +1 Query: 535 FKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQM 654 F+ + K+N+ R E+ +YL+ Q +P D EDIK++ Sbjct: 307 FEILYNSKENVEKRTEIDEYLQIQPLPTD-----EDIKKI 341 >SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces pombe|chr 3|||Manual Length = 381 Score = 26.2 bits (55), Expect = 5.7 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 493 ELINIGDSPPATNVFKEIDADKDNMLSREEVSDYLKK--QMVPADGGEVSEDIK 648 E +N V + I+ D R++V DYLKK Q + + E E +K Sbjct: 296 EKLNDASYDQTRRVLQYINGFSDGSRDRQDVEDYLKKVLQELLCEAEECKEKVK 349 >SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr 1|||Manual Length = 491 Score = 25.8 bits (54), Expect = 7.6 Identities = 18/64 (28%), Positives = 28/64 (43%) Frame = -1 Query: 744 PENSSWLMKPFLSLSSWLEDFLNKFIVTFQHLLDVFAYFTTVGGNHLLLQIVAHFFAGEH 565 PEN L + + + FL K I Q L+D + FTT N L + + F Sbjct: 357 PENRDALWTSNYNQQNPIFQFLKKLIKLRQFLVDNVSGFTTELSNMLFVNEHVYVFRRPG 416 Query: 564 VVLI 553 V+++ Sbjct: 417 VIIV 420 >SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|||Manual Length = 482 Score = 25.8 bits (54), Expect = 7.6 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +1 Query: 493 ELINIGDSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDI---KQMLES 663 ++IN P F + A K M + V D++KK +P G + ED KQ Sbjct: 416 KMINYLQKPVQHEAFFKKYASKKFMKASLFVRDWIKKNSIPL-GDDADEDYTFHKQKRIQ 474 Query: 664 HDKLVEE 684 HD EE Sbjct: 475 HDMKDEE 481 >SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosaccharomyces pombe|chr 1|||Manual Length = 859 Score = 25.8 bits (54), Expect = 7.6 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1 Query: 436 GERGAGNVIPPHATLHFEVELINIGDSP 519 G+ G+G + P AT +FE ++ NI D P Sbjct: 376 GKLGSGLINPLVATQNFEYKMSNILDKP 403 >SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces pombe|chr 1|||Manual Length = 229 Score = 25.8 bits (54), Expect = 7.6 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +1 Query: 163 TFAGPEVTELKTEVVSVPEGCTTKSKH 243 TF ++T L+ +++ +PEG +T KH Sbjct: 174 TFDDLQLTPLQRKLMGLPEGGSTSGKH 200 >SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35 |Schizosaccharomyces pombe|chr 2|||Manual Length = 315 Score = 25.8 bits (54), Expect = 7.6 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +1 Query: 469 HATLHFEVELINIGDSPPATNVFKEIDADKDNMLSREEVSD-YLKKQ 606 H L+ + ELI+ S VF+ ID N+ R+ D Y+K++ Sbjct: 265 HKDLNEDEELISSSPSEVGKRVFRLIDLSTGNVYRRDTGGDIYVKRK 311 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,286,279 Number of Sequences: 5004 Number of extensions: 67702 Number of successful extensions: 216 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 214 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 410448950 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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