Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_G02
(834 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8342| Best HMM Match : FKBP_C (HMM E-Value=0) 195 4e-50
SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 8e-32
SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) 34 0.12
SB_32882| Best HMM Match : tRNA_synt_1c_R2 (HMM E-Value=2.6) 32 0.66
SB_17290| Best HMM Match : tRNA_synt_1c_R2 (HMM E-Value=2.6) 32 0.66
SB_28972| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_14606| Best HMM Match : efhand (HMM E-Value=0.00036) 29 3.5
SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_24439| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 29 4.6
SB_40922| Best HMM Match : JmjC (HMM E-Value=0.092) 29 6.1
SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23) 28 8.1
SB_35370| Best HMM Match : Ank (HMM E-Value=4.8e-06) 28 8.1
SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21) 28 8.1
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 28 8.1
SB_13421| Best HMM Match : Harpin (HMM E-Value=0.62) 28 8.1
>SB_8342| Best HMM Match : FKBP_C (HMM E-Value=0)
Length = 266
Score = 195 bits (475), Expect = 4e-50
Identities = 105/195 (53%), Positives = 128/195 (65%), Gaps = 2/195 (1%)
Frame = +1
Query: 115 MTTLRCVLMLVALAGATFAGPEVT-ELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGH 291
M L +L +VA +G E ELK EVVS PE CT K+ GD L+MHYTG L +G+
Sbjct: 1 MKGLMNLLAIVAFSGLALGAEEPKGELKIEVVSKPEKCTRKTHVGDTLSMHYTGRLANGN 60
Query: 292 KFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPH 471
KFDSS DR + F F +G G VI+GW+QGLLDMC+GEKRKLTIP L YGE GAG IPPH
Sbjct: 61 KFDSSLDRGKTFDFTLGKGMVIQGWEQGLLDMCIGEKRKLTIPPHLAYGENGAGAAIPPH 120
Query: 472 ATLHFEVELINI-GDSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIK 648
ATL+ +VEL+ I G NVF ID + D +L++EEV +YLK+Q GG S+D
Sbjct: 121 ATLYMDVELVEIQGSKESDPNVFGMIDKNNDKVLTQEEVKNYLKEQ-----GGMPSDD-- 173
Query: 649 QMLESHDKLVEEIFQ 693
SHD +V EIFQ
Sbjct: 174 --EASHDTIVSEIFQ 186
>SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 134 bits (324), Expect = 8e-32
Identities = 68/176 (38%), Positives = 108/176 (61%), Gaps = 7/176 (3%)
Frame = +1
Query: 187 ELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRD---QPFTFQIGVGQVI 357
+++ E VP C K+K GD + +HYTG + DG FD++ D QPF F IG G VI
Sbjct: 99 KIEVEETFVPSDCENKTKVGDHVVVHYTGWMQDGSLFDTTRDHRKGYQPFEFTIGGGTVI 158
Query: 358 KGWDQGLLDMCVGEKRKLTIPASLGYGERGA----GNVIPPHATLHFEVELINIGDSPPA 525
KG++QG+ MCVG+KRK+ IP +L YG++G+ GN+ + TL + +EL ++ PP
Sbjct: 159 KGFEQGVTGMCVGQKRKIVIPPALAYGKKGSGDVPGNLDLTNTTLTYNLELFDVRKPPPH 218
Query: 526 TNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQ 693
+++F +D + D LSREEVS Y++KQ A+ ++ H+++V+ +F+
Sbjct: 219 SDMFSHMDENGDRKLSREEVSAYMRKQ---AEAQFAPTYDQRWQHHHERMVDNVFE 271
Score = 35.9 bits (79), Expect = 0.041
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 695 HEDKDKNGFISHEEFSGPK 751
+ED D++G ISHEEFSGPK
Sbjct: 272 YEDHDEDGHISHEEFSGPK 290
>SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)
Length = 639
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +1
Query: 244 GDMLTMHYTGTLDD----GHKFDSSYDRDQPFTFQIGVGQVIKG 363
GD + + YTG L + G FDS+ D+ F F+ G G+VIKG
Sbjct: 122 GDAVEVKYTGWLLENGNFGKVFDSNAGTDKTFKFKTGKGKVIKG 165
>SB_32882| Best HMM Match : tRNA_synt_1c_R2 (HMM E-Value=2.6)
Length = 170
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +1
Query: 508 GDSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLES 663
GD P+ N + ++ ++ L+ EE++ + ++++ GG+ SE I++ ES
Sbjct: 43 GDKKPSANFLEFLNTLQETPLTLEELARAVDREILTEAGGQASERIREFDES 94
>SB_17290| Best HMM Match : tRNA_synt_1c_R2 (HMM E-Value=2.6)
Length = 231
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +1
Query: 508 GDSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLES 663
GD P+ N + ++ ++ L+ EE++ + ++++ GG+ SE I++ ES
Sbjct: 54 GDKKPSANFLEFLNTLQETPLTLEELARAVDREILTEAGGQASERIREFDES 105
>SB_28972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 43 CSCSTGAVGNARFSCKKKLFVSSTMTTLRCVLM--LVALAGATFAGPEVTELKTEVVSVP 216
C+C N SCKK +FV+ T+R +L + + P + L EV ++
Sbjct: 3 CACGANFTINHALSCKKGVFVAQRHDTIRNLLTSHISKVCKNVETEPSLQPLDNEVFNLQ 62
Query: 217 EGCTTKSKHGDM 252
T++ DM
Sbjct: 63 STTTSREARLDM 74
>SB_14606| Best HMM Match : efhand (HMM E-Value=0.00036)
Length = 633
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 535 FKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSE 639
F E+D +KD+++SREE +Y +++ G E+ +
Sbjct: 576 FDEVDVNKDSLISREEFINYQQEKYKRLMGREMPD 610
>SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 465
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -1
Query: 570 EHVVLIGVDFLEHVCGRWRVTDVDQLHFEMQCSVGRNHVAGSAL 439
E V+ + V +E V R + DV QLH + + S+GR V+ L
Sbjct: 181 ESVIAVRVHLVECVWFRLPILDVQQLHVKYERSLGRELVSNLLL 224
>SB_24439| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 733 LMADEAVFVFIFVAGRFPQQVYRDFPTFA*C 641
+ D + FV FV R PQ+++R+ PTF C
Sbjct: 1 MAVDVSAFVKWFVIFRNPQEIWREEPTFLMC 31
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 532 VFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVE 681
+F+EID D + E+S+ LKK + ++ +K M ++D ++
Sbjct: 73 IFQEIDEDNSGYIDHNEISNALKKLDINLPSRQIDGILKGMDLNNDNRID 122
>SB_40922| Best HMM Match : JmjC (HMM E-Value=0.092)
Length = 403
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 535 FKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSE 639
F E+DADKD ++ EE+ + + GG V E
Sbjct: 340 FAEVDADKDGFVTPEEMMSLHSRDLERLLGGTVQE 374
>SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23)
Length = 308
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 532 VFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVE 681
+ +E+D +KD ++ EE++D++K V D+K+ + D V+
Sbjct: 76 LIREVDNNKDGAVTTEELTDWVKGVFKKRSMEGVDNDLKEKDANEDGKVD 125
>SB_35370| Best HMM Match : Ank (HMM E-Value=4.8e-06)
Length = 813
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = -1
Query: 609 HLLLQIVAHFFAGEHVVLIGVDFLEHVCGRWRVTDVDQLHFEMQCSVGRNHVAGSALSVA 430
H L H F E + VDF+ C WR+ + Q + G + S L +
Sbjct: 734 HRLFLYGIHGFFDEIMFTATVDFIASGCSDWRLRGHSSMWSLFQYAFGSYLIERSFLFLK 793
Query: 429 QGCGNSQFT 403
Q S+FT
Sbjct: 794 QNTALSRFT 802
>SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21)
Length = 928
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 741 ENSSWLMKPFLSLSSWLEDFLNKFIVTFQHLLDVFAYFTTVGGNHLL 601
E SW + L SW+E L +F+ +Q F + T GG +L
Sbjct: 182 EQLSWFLTKLRELQSWMEKNL-QFVAPYQD--SSFPHMTLTGGQQVL 225
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -3
Query: 322 VDRDHNSSRTCVRRLACQCSAW*AYRRAWTSWC 224
V D +S C R C W +AW WC
Sbjct: 956 VSPDASSFEYCARNRRCASQRWKDSAKAWLLWC 988
>SB_13421| Best HMM Match : Harpin (HMM E-Value=0.62)
Length = 375
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 431 PKDAGIVSLRFSPTHMSSKPWSHPLITC 348
PK G S H SS W HP ++C
Sbjct: 257 PKSHGAASPSLMGQHFSSLMWQHPQVSC 284
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,340,251
Number of Sequences: 59808
Number of extensions: 546341
Number of successful extensions: 1420
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2347493764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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