Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G01
         (1469 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1L2E9 Cluster: Putative uncharacterized protein; n=3; ...    35   6.2  
UniRef50_Q9VZC2 Cluster: CG15021-PA; n=1; Drosophila melanogaste...    34   8.2  
UniRef50_A7SQQ5 Cluster: Predicted protein; n=3; Nematostella ve...    34   8.2  

>UniRef50_A1L2E9 Cluster: Putative uncharacterized protein; n=3; Danio
            rerio|Rep: Putative uncharacterized protein - Danio rerio
            (Zebrafish) (Brachydanio rerio)
          Length = 428

 Score = 34.7 bits (76), Expect = 6.2
 Identities = 17/58 (29%), Positives = 20/58 (34%)
 Frame = +2

Query: 863  PPXSXNLLXPXNPPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPP 1036
            PP +  +  P  PPP       PP  P    + S       PP        PPP  PP
Sbjct: 355  PPGNMGVPPPPPPPPPGNMCIPPPPPPPPGYTGSSLPPPAPPPPQNASMAPPPPPPPP 412


>UniRef50_Q9VZC2 Cluster: CG15021-PA; n=1; Drosophila
            melanogaster|Rep: CG15021-PA - Drosophila melanogaster
            (Fruit fly)
          Length = 420

 Score = 34.3 bits (75), Expect = 8.2
 Identities = 20/62 (32%), Positives = 22/62 (35%)
 Frame = +2

Query: 863  PPXSXNLLXPXNPPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRX 1042
            PP       P  PPP       PP  P    + S    A  PP        PPPR PP+ 
Sbjct: 103  PPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPS----APAPPPSYGPPQTPPPRPPPQP 158

Query: 1043 HP 1048
             P
Sbjct: 159  TP 160


>UniRef50_A7SQQ5 Cluster: Predicted protein; n=3; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1553

 Score = 34.3 bits (75), Expect = 8.2
 Identities = 17/58 (29%), Positives = 20/58 (34%)
 Frame = +2

Query: 860  NPPXSXNLLXPXNPPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXP 1033
            +PP +  L  P  P P    +  PP               R PP     Q  PPPR P
Sbjct: 1375 SPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQP 1432


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,914,057
Number of Sequences: 1657284
Number of extensions: 3261746
Number of successful extensions: 9249
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8313
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 155262597875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)