BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G01 (1469 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 32 1.3 12_02_1174 - 26696869-26698191 31 3.0 03_01_0515 - 3864796-3865425 31 3.0 02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 30 4.0 08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 7.0 >08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560, 33643-34147,34250-34358,34436-34548,34619-34806, 35481-36129,36169-36691,36760-36911,37042-37141, 37301-37416 Length = 1530 Score = 31.9 bits (69), Expect = 1.3 Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 3/56 (5%) Frame = +2 Query: 890 PXNPPPQXKDLXXPPX---HPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRXHP 1048 P PPP D PP P SDS LPP+ PPP P P Sbjct: 1126 PDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPP 1181 >12_02_1174 - 26696869-26698191 Length = 440 Score = 30.7 bits (66), Expect = 3.0 Identities = 18/64 (28%), Positives = 24/64 (37%) Frame = +2 Query: 857 YNPPXSXNLLXPXNPPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPP 1036 + P + + + P PPP+ + PP P LPP PPPR PP Sbjct: 113 FKTPPALSPVPPPPPPPRTRTRVEPPHRPPPV---KPQPPPSLPPPPPPPPPPPPPR-PP 168 Query: 1037 RXHP 1048 P Sbjct: 169 SVKP 172 >03_01_0515 - 3864796-3865425 Length = 209 Score = 30.7 bits (66), Expect = 3.0 Identities = 16/50 (32%), Positives = 16/50 (32%) Frame = +2 Query: 899 PPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRXHP 1048 PPP L PP P S PP PPP PP P Sbjct: 62 PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSP 111 >02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 Length = 291 Score = 30.3 bits (65), Expect = 4.0 Identities = 17/50 (34%), Positives = 18/50 (36%) Frame = +2 Query: 899 PPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRXHP 1048 PPP+ K PP P S PPA PPP PR P Sbjct: 113 PPPRKKPQFQPPPQPPRAWDPSPPPP---PPAPAAPVLVPPPAPAPRPAP 159 >08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132, 3308247-3308315,3308427-3308513,3308753-3308858, 3309118-3309237,3309327-3309406,3309497-3309878, 3310746-3310814,3311460-3312202 Length = 644 Score = 29.5 bits (63), Expect = 7.0 Identities = 15/50 (30%), Positives = 17/50 (34%) Frame = +2 Query: 899 PPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRXHP 1048 PPP + PP P +S PP PPP PP P Sbjct: 82 PPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQP 131 Score = 29.1 bits (62), Expect = 9.3 Identities = 15/50 (30%), Positives = 16/50 (32%) Frame = +2 Query: 899 PPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRXHP 1048 PPP PP P + S PP PPP PP P Sbjct: 83 PPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,186,604 Number of Sequences: 37544 Number of extensions: 142103 Number of successful extensions: 574 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 396 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 545 length of database: 14,793,348 effective HSP length: 85 effective length of database: 11,602,108 effective search space used: 4687251632 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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