Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G01
         (1469 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    32   1.3  
12_02_1174 - 26696869-26698191                                         31   3.0  
03_01_0515 - 3864796-3865425                                           31   3.0  
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317           30   4.0  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   7.0  

>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
 Frame = +2

Query: 890  PXNPPPQXKDLXXPPX---HPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRXHP 1048
            P  PPP   D   PP     P    SDS      LPP+       PPP   P   P
Sbjct: 1126 PDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPP 1181


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 18/64 (28%), Positives = 24/64 (37%)
 Frame = +2

Query: 857  YNPPXSXNLLXPXNPPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPP 1036
            +  P + + + P  PPP+ +    PP  P             LPP        PPPR PP
Sbjct: 113  FKTPPALSPVPPPPPPPRTRTRVEPPHRPPPV---KPQPPPSLPPPPPPPPPPPPPR-PP 168

Query: 1037 RXHP 1048
               P
Sbjct: 169  SVKP 172


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 16/50 (32%), Positives = 16/50 (32%)
 Frame = +2

Query: 899  PPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRXHP 1048
            PPP    L  PP  P    S         PP        PPP  PP   P
Sbjct: 62   PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSP 111


>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
          Length = 291

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 17/50 (34%), Positives = 18/50 (36%)
 Frame = +2

Query: 899  PPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRXHP 1048
            PPP+ K    PP  P      S       PPA       PPP   PR  P
Sbjct: 113  PPPRKKPQFQPPPQPPRAWDPSPPPP---PPAPAAPVLVPPPAPAPRPAP 159


>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
            3308247-3308315,3308427-3308513,3308753-3308858,
            3309118-3309237,3309327-3309406,3309497-3309878,
            3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 15/50 (30%), Positives = 17/50 (34%)
 Frame = +2

Query: 899  PPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRXHP 1048
            PPP  +    PP  P     +S       PP        PPP  PP   P
Sbjct: 82   PPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQP 131



 Score = 29.1 bits (62), Expect = 9.3
 Identities = 15/50 (30%), Positives = 16/50 (32%)
 Frame = +2

Query: 899  PPPQXKDLXXPPXHPXXXXSDSXXXXARLPPAXRXXQXXPPPRXPPRXHP 1048
            PPP       PP  P    + S       PP        PPP  PP   P
Sbjct: 83   PPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,186,604
Number of Sequences: 37544
Number of extensions: 142103
Number of successful extensions: 574
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4687251632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)