Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F22
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 223 LTVDCATSRKGKTRRFLSTLHHNSLQLSSR 312
           LT +CAT  +      + TLHH+  +L +R
Sbjct: 562 LTKNCATKAQSVVLGRICTLHHHLSKLVTR 591


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 229 VDCATSRKGKTRRFLSTLHHNSLQLSSRP 315
           + CA +  GKT  F+  + HN L   + P
Sbjct: 199 MSCAQTGSGKTAAFMLPIIHNLLSDKNPP 227


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 150 VTTRLCREVDASACTVNXVRIDPCVNSRLCHLKK 251
           +T +   E  A   T+N  R+ P + S LC +K+
Sbjct: 50  ITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKE 83


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 238 HSRLLTQGSIRTXFTVHALASTSRHS 161
           +SRL+  GS R  F V  +    RH+
Sbjct: 723 YSRLVGDGSARRRFVVAVVGFLRRHN 748


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,361
Number of Sequences: 336
Number of extensions: 2971
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)