BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_F22 (873 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, t... 35 0.44 X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissu... 34 0.58 BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, t... 34 0.58 BC069632-1|AAH69632.1| 549|Homo sapiens tigger transposable ele... 33 1.0 BC069623-1|AAH69623.1| 549|Homo sapiens tigger transposable ele... 33 1.0 AF251050-1|AAK34940.1| 511|Homo sapiens jerky protein. 33 1.0 >AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, type C2 precursor variant protein. Length = 151 Score = 34.7 bits (76), Expect = 0.44 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +3 Query: 150 VTTRLCREVDASACTVNXVRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTGLFGL 329 V R C VD + V + PC ++ C L KG++ V+ FT + K + G+ Sbjct: 22 VQFRDCGSVDG---VIKEVNVSPCP-TQPCQLSKGQSYSVNVTFTSNVQSKSSKAVVHGI 77 Query: 330 KNGAEIPF 353 G +PF Sbjct: 78 LMGVPVPF 85 >X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissue specific mRNA. ). Length = 151 Score = 34.3 bits (75), Expect = 0.58 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = +3 Query: 165 CREVDASACTVNXVRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAE 344 C VD + V + PC ++ C L KG++ V+ FT + K + G+ G Sbjct: 27 CGSVDG---VIKEVNVSPCP-TQPCQLSKGQSYSVNVTFTSNIQSKSSKAVVHGILMGVP 82 Query: 345 IPF 353 +PF Sbjct: 83 VPF 85 >BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, type C2 protein. Length = 151 Score = 34.3 bits (75), Expect = 0.58 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = +3 Query: 165 CREVDASACTVNXVRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAE 344 C VD + V + PC ++ C L KG++ V+ FT + K + G+ G Sbjct: 27 CGSVDG---VIKEVNVSPCP-TQPCQLSKGQSYSVNVTFTSNIQSKSSKAVVHGILMGVP 82 Query: 345 IPF 353 +PF Sbjct: 83 VPF 85 >BC069632-1|AAH69632.1| 549|Homo sapiens tigger transposable element derived 7 protein. Length = 549 Score = 33.5 bits (73), Expect = 1.0 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = -2 Query: 347 NFSAILQPKEAGLELSCREL--WCKVERNLRVFPFLEVAQSTVNTGVNSDXVHSTRAGV 177 N S ++QP G+ LSC+ L W ++E +L +F + Q + GV+ +++ ++ + Sbjct: 322 NTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDEQEKGDKGVSKIKIYNIKSAI 380 >BC069623-1|AAH69623.1| 549|Homo sapiens tigger transposable element derived 7 protein. Length = 549 Score = 33.5 bits (73), Expect = 1.0 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = -2 Query: 347 NFSAILQPKEAGLELSCREL--WCKVERNLRVFPFLEVAQSTVNTGVNSDXVHSTRAGV 177 N S ++QP G+ LSC+ L W ++E +L +F + Q + GV+ +++ ++ + Sbjct: 322 NTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDEQEKGDKGVSKIKIYNIKSAI 380 >AF251050-1|AAK34940.1| 511|Homo sapiens jerky protein. Length = 511 Score = 33.5 bits (73), Expect = 1.0 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = -2 Query: 347 NFSAILQPKEAGLELSCREL--WCKVERNLRVFPFLEVAQSTVNTGVNSDXVHSTRAGV 177 N S ++QP G+ LSC+ L W ++E +L +F + Q + GV+ +++ ++ + Sbjct: 322 NSSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDEQEKGDKGVSKIKIYNIKSAI 380 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 102,804,650 Number of Sequences: 237096 Number of extensions: 1859604 Number of successful extensions: 2862 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2779 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2862 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 11104084400 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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