Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F22
         (873 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70308-10|CAA94345.2|  505|Caenorhabditis elegans Hypothetical p...    33   0.35 
AL023838-4|CAA19504.1|  218|Caenorhabditis elegans Hypothetical ...    30   2.5  
AF025467-10|AAB71040.2|  154|Caenorhabditis elegans He1 homologu...    29   4.3  
Z93373-3|CAD54120.1|  449|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z83245-12|CAD54180.1|  449|Caenorhabditis elegans Hypothetical p...    29   5.7  

>Z70308-10|CAA94345.2|  505|Caenorhabditis elegans Hypothetical
           protein F49E11.3 protein.
          Length = 505

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = -3

Query: 568 IQYVSSFTKPALTFVL*QHIWLSWSSFQASIEFKVSXXQFFSNMQTKV*GLSFASFGG 395
           I+ VS  TK  L F++   IW  W +F  S  + V+  Q+   M++ V G   AS GG
Sbjct: 213 IRTVSDPTKAILGFLM---IWWGWLAFNTSSNYAVTHGQWTEGMRSAV-GTILASAGG 266


>AL023838-4|CAA19504.1|  218|Caenorhabditis elegans Hypothetical
           protein Y43C5A.4 protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 211 LTPVLTVDCATSRKGKTRRFLSTLH 285
           LTP++T  C+   KGK ++ LS+ H
Sbjct: 31  LTPIITAQCSKKPKGKKKKKLSSSH 55


>AF025467-10|AAB71040.2|  154|Caenorhabditis elegans He1 homologue
           protein 1 protein.
          Length = 154

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = +3

Query: 138 EFNVVTTRLCREVDASACTVNXVRIDPCV-----NSRLCHLKKGKNAKVSFDFTPQFSTT 302
           EF  +  ++C+    S  TV+ V+ D C        ++C  KKG    +   F P   T 
Sbjct: 16  EFIEIGYKVCK----SDGTVSQVKADGCELTVKDGKKVCLFKKGSRPIIQIAFKPSKDTD 71

Query: 303 KLKTGL 320
           KLKT +
Sbjct: 72  KLKTSV 77


>Z93373-3|CAD54120.1|  449|Caenorhabditis elegans Hypothetical
           protein ZK131.11b protein.
          Length = 449

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
 Frame = +1

Query: 88  LSXLGCYSLHFSAVVXLNSTSSPQGYVGKWTPARVL*TXSELTP--VLTVDCATSRKGKT 261
           LS L C S     +  + +T+S +G       +++  T S L P  +L+VD   SR G++
Sbjct: 44  LSRLKCSSPELHHLSTVAATASERG-------SQLTATSSTLGPSTLLSVDKRHSRLGES 96

Query: 262 RRFLSTLHHNSLQLS 306
              LS +HH   QLS
Sbjct: 97  SPNLSRIHHTHTQLS 111


>Z83245-12|CAD54180.1|  449|Caenorhabditis elegans Hypothetical
           protein ZK131.11b protein.
          Length = 449

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
 Frame = +1

Query: 88  LSXLGCYSLHFSAVVXLNSTSSPQGYVGKWTPARVL*TXSELTP--VLTVDCATSRKGKT 261
           LS L C S     +  + +T+S +G       +++  T S L P  +L+VD   SR G++
Sbjct: 44  LSRLKCSSPELHHLSTVAATASERG-------SQLTATSSTLGPSTLLSVDKRHSRLGES 96

Query: 262 RRFLSTLHHNSLQLS 306
              LS +HH   QLS
Sbjct: 97  SPNLSRIHHTHTQLS 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,808,691
Number of Sequences: 27780
Number of extensions: 293120
Number of successful extensions: 614
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)