Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F22
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   8.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   8.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   8.5  
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      22   8.5  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 509 DVLLQNECQGWFSK 550
           + L + +CQ WF K
Sbjct: 36  EALKERQCQNWFDK 49


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 270 SFDFTPQFSTTKLKTGLFGLKNG 338
           +FD+ P+++   +    F LKNG
Sbjct: 228 TFDYDPRYAKMTIDGESFTLKNG 250


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 517 QHIWLSWSSFQASI 476
           QH  L W+++Q+SI
Sbjct: 5   QHFCLRWNNYQSSI 18


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 517 QHIWLSWSSFQASI 476
           QH  L W+++Q+SI
Sbjct: 5   QHFCLRWNNYQSSI 18


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,413
Number of Sequences: 438
Number of extensions: 3695
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)