Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F21
         (985 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   1.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   1.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   6.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   6.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   6.3  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   6.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   6.3  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    22   6.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   6.3  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNEIPLEGSGKSVFKPWDKKN 456
           KE+   +Y +  +RI++ H  CL E  ++   ++    W K+N
Sbjct: 259 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 301


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNEIPLEGSGKSVFKPWDKKN 456
           KE+   +Y +  +RI++ H  CL E  ++   ++    W K+N
Sbjct: 261 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 303


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 208 IKNFKQFPKSFNLKQISLTKKCSQSINLVNQ*TN 309
           +  F +F K   +  I +TK C  + NL+ +  N
Sbjct: 289 VVTFLKFIKKIQIFGIMITKACMSASNLIQRTPN 322


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNE 402
           KE+   +Y +  +RI++ H  CL E
Sbjct: 237 KEFHFNRYLTRRRRIEIAHALCLTE 261


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNE 402
           KE+   +Y +  +RI++ H  CL E
Sbjct: 237 KEFHFNRYLTRRRRIEIAHALCLTE 261


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNE 402
           KE+   +Y +  +RI++ H  CL E
Sbjct: 237 KEFHFNRYLTRRRRIEIAHALCLTE 261


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNE 402
           KE+   +Y +  +RI++ H  CL E
Sbjct: 193 KEFHFNRYLTRRRRIEIAHALCLTE 217


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNE 402
           KE+   +Y +  +RI++ H  CL E
Sbjct: 237 KEFHFNRYLTRRRRIEIAHALCLTE 261


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNE 402
           KE+   +Y +  +RI++ H  CL E
Sbjct: 25  KEFHFNRYLTRRRRIEIAHALCLTE 49


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNE 402
           KE+   +Y +  +RI++ H  CL E
Sbjct: 237 KEFHFNRYLTRRRRIEIAHALCLTE 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,989
Number of Sequences: 336
Number of extensions: 4916
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27926910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)