Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F21
(985 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0343 + 21155237-21155496,21155596-21155842,21155939-211560... 81 1e-15
03_06_0291 + 32882831-32882998,32883238-32883361,32884528-328845... 54 1e-07
08_02_0290 + 15383473-15383669,15385057-15385267,15386389-153864... 30 2.5
06_03_0019 + 15506702-15506896,15507741-15507875,15508264-155085... 29 4.3
07_03_0301 + 16449586-16449671,16450028-16451135 29 5.7
06_03_0809 + 24814590-24816593 29 5.7
02_02_0549 + 11410129-11412180 28 9.9
>01_05_0343 + 21155237-21155496,21155596-21155842,21155939-21156064,
21156291-21156428,21156513-21156650,21156756-21157013,
21157404-21157541,21158023-21158092,21158267-21158480,
21158614-21158719,21159844-21160077,21160836-21161000,
21161083-21161232,21161308-21161399,21161631-21161712,
21161800-21161883,21161980-21162096,21162179-21162289,
21162698-21162892,21164495-21164575,21165671-21165720,
21165978-21165990,21166518-21166600,21166693-21166833,
21166879-21166936,21167023-21167072,21167474-21167582,
21167666-21167727,21168321-21168363
Length = 1204
Score = 81.4 bits (192), Expect = 1e-15
Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +1
Query: 589 RLFKNRPNMTFDDVM-IEPDQVFELQKDTDGILEYCPKIVTFSSVSHLTMHFPKNFGAET 765
R+F NR + F+D ++P Q +EL ++ G+LEY + F V++LT+HFP+NFG +T
Sbjct: 1097 RMFINREGIDFNDAQNMQPVQEWELAENLQGVLEYQTRYSRFQGVANLTLHFPENFGGDT 1156
Query: 766 TKIYYIGLKGEWTPSHR 816
TKIYYIGL+GE T + R
Sbjct: 1157 TKIYYIGLRGEATQNKR 1173
Score = 35.1 bits (77), Expect = 0.087
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 394 LNEIPLEGSGKSVFKPWDKKNWIEAKFVES-DTDEELLFNIP 516
LNE + GS KSVFKPW+++ F+ES + D ELL IP
Sbjct: 979 LNE-SVAGSVKSVFKPWEQRLDTSGGFLESNEGDPELLVFIP 1019
>03_06_0291 +
32882831-32882998,32883238-32883361,32884528-32884576,
32884672-32884732,32884871-32884917,32885005-32885082,
32885462-32885510
Length = 191
Score = 54.4 bits (125), Expect = 1e-07
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Frame = +1
Query: 370 IDLDHLECLNEIPLEGSGKSVFKPWDKKNWIEAKFVESDTDEELLFNIPFTGNIKLKGIK 549
ID +ECLN+ P ++ + + E ++ SD+DE+LL +IPF +KL
Sbjct: 34 IDWSGVECLNQDPAHSIVNALKQGYRDD---EGLYLASDSDEQLLIHIPFMQVVKLHSAL 90
Query: 550 VASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFELQKDTDGILEYCP---KIVTFSSV 720
+ D P ++LF N+ +M F +V P L ++ + E P K V F +V
Sbjct: 91 FKGPEEDG-PKTIKLFCNKEHMGFSNVNDYPPS-DSLDLSSNHLSESKPMQLKYVKFQNV 148
Query: 721 SHLTMHFPKN-FGAETTKIYYIGLKG 795
LT+ N G++ +KI I L G
Sbjct: 149 RSLTIFIEDNQSGSDVSKILKIALYG 174
>08_02_0290 +
15383473-15383669,15385057-15385267,15386389-15386440,
15386545-15386863,15387022-15387121,15387391-15387657,
15387780-15387857,15387943-15388032,15388119-15388168,
15388267-15388366,15388777-15388875,15389023-15389136,
15389238-15389412,15389726-15390132,15390565-15390639,
15391412-15391438
Length = 786
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 475 VESDTDEELLFNIPFTGNIKLKGIKVASEDTDSHPSK-LRLFKNRPNMTFDDVMIEPDQ- 648
VE+ DE +I G++K K + +++ T S + R +NRP+ T +DV E ++
Sbjct: 177 VENSEDERRRLSI---GSLKKKALNASNKLTHSLKKRGKRKVENRPSFTIEDVRDEEEER 233
Query: 649 -VFELQKD 669
VF Q++
Sbjct: 234 AVFSFQQE 241
>06_03_0019 +
15506702-15506896,15507741-15507875,15508264-15508501,
15508652-15508855,15508945-15509111
Length = 312
Score = 29.5 bits (63), Expect = 4.3
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 571 SHPSKLRLFKNRPNMTFDDVMIEPDQVFELQKDTDGILEYCPKI--VTFSSVSHLTMHFP 744
SH + L++ + TFD V I D+V + +++ L I + H
Sbjct: 226 SHNELVSLWEKKVGKTFDRVYIPEDEVLKKIQESPAPLNVVLSINHSVWVKGDHTNFEIE 285
Query: 745 KNFGAETTKIY 777
+FG E T++Y
Sbjct: 286 PSFGVEATELY 296
>07_03_0301 + 16449586-16449671,16450028-16451135
Length = 397
Score = 29.1 bits (62), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 392 HSKWSKSILFHEDLYLYTKYSFNTTRDSLVHWF 294
H K SK + E L+ Y K +FN SL HW+
Sbjct: 347 HKKLSKCKMLQEQLHQYKKLAFNA--HSLEHWW 377
>06_03_0809 + 24814590-24816593
Length = 667
Score = 29.1 bits (62), Expect = 5.7
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 699 DCYIFFSITSNNALSKELWGRNNKNLLHWIKRRMDT*S*AWVLPYAHMRVMP 854
D Y+ F + N ALS + G N L W +R A L Y H P
Sbjct: 433 DTYLVFELAENGALSDWIRGDNGGRALSWRQRMQAALDVADGLNYLHNYTRP 484
>02_02_0549 + 11410129-11412180
Length = 683
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 690 LSKDCYIFFSITSNNALSKELWGRNNKNLLHWIKR 794
L + + + N +L K L+G NN +L W +R
Sbjct: 425 LKNELLLVYDYMPNGSLDKYLYGHNNMPVLSWAQR 459
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,819,209
Number of Sequences: 37544
Number of extensions: 432942
Number of successful extensions: 920
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2870111300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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