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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F21
         (985 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15313-11|AAK68622.1|  208|Caenorhabditis elegans Hypothetical p...   144   1e-34
AF143900-1|AAF66677.1|  284|Caenorhabditis elegans thioredoxin-l...    44   2e-04
AF143405-1|AAF66636.1|  284|Caenorhabditis elegans thioredoxin-l...    44   2e-04
AC024810-17|AAF60759.1|  284|Caenorhabditis elegans Hypothetical...    44   2e-04
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    31   1.3  
U88170-8|AAB42244.1|  345|Caenorhabditis elegans Serpentine rece...    29   3.8  
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p...    28   8.9  

>L15313-11|AAK68622.1|  208|Caenorhabditis elegans Hypothetical
           protein ZK353.9 protein.
          Length = 208

 Score =  144 bits (348), Expect = 1e-34
 Identities = 70/159 (44%), Positives = 107/159 (67%)
 Frame = +1

Query: 340 VYKYKSS*KRIDLDHLECLNEIPLEGSGKSVFKPWDKKNWIEAKFVESDTDEELLFNIPF 519
           VY+Y      ID++ +  LNE  ++G+GK VFK  +K++    ++VESD D ELLFNIPF
Sbjct: 23  VYRYDMV-SYIDMEKVTTLNE-SVDGAGKKVFKVMEKRD-DRLEYVESDCDHELLFNIPF 79

Query: 520 TGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFELQKDTDGILEYCPK 699
           TG+++L G+ +  ++  SHP+K+RLFK+R  M+FDD  IE DQ  +L++D  G+++Y  K
Sbjct: 80  TGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSFDDCSIEADQEIDLKQDPQGLVDYPLK 139

Query: 700 IVTFSSVSHLTMHFPKNFGAETTKIYYIGLKGEWTPSHR 816
              F ++ +L++    NFG + TKIYYIGL+GE+    R
Sbjct: 140 ASKFGNIHNLSILVDANFGEDETKIYYIGLRGEFQHEFR 178


>AF143900-1|AAF66677.1|  284|Caenorhabditis elegans thioredoxin-like
           protein protein.
          Length = 284

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
 Frame = +1

Query: 481 SDTDEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 654
           SD DE+L+ ++PF   +K+  I +    +D  P K+++F N P  T FD+   +EP Q+ 
Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211

Query: 655 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 756
           E  + +  G  +    K V F +V ++      N G
Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247


>AF143405-1|AAF66636.1|  284|Caenorhabditis elegans thioredoxin-like
           protein TXL protein.
          Length = 284

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
 Frame = +1

Query: 481 SDTDEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 654
           SD DE+L+ ++PF   +K+  I +    +D  P K+++F N P  T FD+   +EP Q+ 
Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211

Query: 655 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 756
           E  + +  G  +    K V F +V ++      N G
Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247


>AC024810-17|AAF60759.1|  284|Caenorhabditis elegans Hypothetical
           protein Y54E10A.3 protein.
          Length = 284

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
 Frame = +1

Query: 481 SDTDEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 654
           SD DE+L+ ++PF   +K+  I +    +D  P K+++F N P  T FD+   +EP Q+ 
Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211

Query: 655 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 756
           E  + +  G  +    K V F +V ++      N G
Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
 Frame = +1

Query: 370  IDLDHLECLNEIPLEGSGKSVF---KPWDKKNWIEA--KFVE-SDTDEELL 504
            +D+DH     ++ +    + ++   KPW+K NW+EA  +F+  S+T E++L
Sbjct: 4624 LDIDHEPFSKQVKMGQYDRMLYGNPKPWNKDNWVEACDQFLNYSNTKEDVL 4674


>U88170-8|AAB42244.1|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein49 protein.
          Length = 345

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = -2

Query: 540 FKFYISSEWY---IKQQFFISITFNKFCFYPILF-VPRFKNTF 424
           F  + +SE+     K QFF+ +  N F FY ILF  P++ + F
Sbjct: 22  FSIFSTSEFLSFGAKSQFFVLVPINLFGFYCILFKTPKYMSEF 64


>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
           protein T08A9.1 protein.
          Length = 1330

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = +1

Query: 211 KNFKQFPKSFNL----KQISLTKKCSQSINLVNQ*TNESRVVLKEYLVYKYKSS*KRIDL 378
           +NF +F     +    KQ  L    ++    V Q  +  RVVL + + Y+YKS+  RI +
Sbjct: 339 ENFSEFRNMVRVFDQSKQEILKNLRTRMSGFVVQNYDRLRVVLNDIVQYEYKSNAVRIHM 398

Query: 379 DHLECLNEIPL 411
           D +  + + P+
Sbjct: 399 DLIGQIRDAPI 409


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,908,533
Number of Sequences: 27780
Number of extensions: 436688
Number of successful extensions: 1049
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2563248310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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