BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_F21 (985 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L15313-11|AAK68622.1| 208|Caenorhabditis elegans Hypothetical p... 144 1e-34 AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 44 2e-04 AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 44 2e-04 AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 44 2e-04 AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 31 1.3 U88170-8|AAB42244.1| 345|Caenorhabditis elegans Serpentine rece... 29 3.8 U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 28 8.9 >L15313-11|AAK68622.1| 208|Caenorhabditis elegans Hypothetical protein ZK353.9 protein. Length = 208 Score = 144 bits (348), Expect = 1e-34 Identities = 70/159 (44%), Positives = 107/159 (67%) Frame = +1 Query: 340 VYKYKSS*KRIDLDHLECLNEIPLEGSGKSVFKPWDKKNWIEAKFVESDTDEELLFNIPF 519 VY+Y ID++ + LNE ++G+GK VFK +K++ ++VESD D ELLFNIPF Sbjct: 23 VYRYDMV-SYIDMEKVTTLNE-SVDGAGKKVFKVMEKRD-DRLEYVESDCDHELLFNIPF 79 Query: 520 TGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFELQKDTDGILEYCPK 699 TG+++L G+ + ++ SHP+K+RLFK+R M+FDD IE DQ +L++D G+++Y K Sbjct: 80 TGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSFDDCSIEADQEIDLKQDPQGLVDYPLK 139 Query: 700 IVTFSSVSHLTMHFPKNFGAETTKIYYIGLKGEWTPSHR 816 F ++ +L++ NFG + TKIYYIGL+GE+ R Sbjct: 140 ASKFGNIHNLSILVDANFGEDETKIYYIGLRGEFQHEFR 178 >AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like protein protein. Length = 284 Score = 43.6 bits (98), Expect = 2e-04 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%) Frame = +1 Query: 481 SDTDEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 654 SD DE+L+ ++PF +K+ I + +D P K+++F N P T FD+ +EP Q+ Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211 Query: 655 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 756 E + + G + K V F +V ++ N G Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247 >AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like protein TXL protein. Length = 284 Score = 43.6 bits (98), Expect = 2e-04 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%) Frame = +1 Query: 481 SDTDEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 654 SD DE+L+ ++PF +K+ I + +D P K+++F N P T FD+ +EP Q+ Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211 Query: 655 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 756 E + + G + K V F +V ++ N G Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247 >AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical protein Y54E10A.3 protein. Length = 284 Score = 43.6 bits (98), Expect = 2e-04 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%) Frame = +1 Query: 481 SDTDEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 654 SD DE+L+ ++PF +K+ I + +D P K+++F N P T FD+ +EP Q+ Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211 Query: 655 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 756 E + + G + K V F +V ++ N G Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247 >AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical protein F39C12.1 protein. Length = 5105 Score = 31.1 bits (67), Expect = 1.3 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 6/51 (11%) Frame = +1 Query: 370 IDLDHLECLNEIPLEGSGKSVF---KPWDKKNWIEA--KFVE-SDTDEELL 504 +D+DH ++ + + ++ KPW+K NW+EA +F+ S+T E++L Sbjct: 4624 LDIDHEPFSKQVKMGQYDRMLYGNPKPWNKDNWVEACDQFLNYSNTKEDVL 4674 >U88170-8|AAB42244.1| 345|Caenorhabditis elegans Serpentine receptor, class h protein49 protein. Length = 345 Score = 29.5 bits (63), Expect = 3.8 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = -2 Query: 540 FKFYISSEWY---IKQQFFISITFNKFCFYPILF-VPRFKNTF 424 F + +SE+ K QFF+ + N F FY ILF P++ + F Sbjct: 22 FSIFSTSEFLSFGAKSQFFVLVPINLFGFYCILFKTPKYMSEF 64 >U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical protein T08A9.1 protein. Length = 1330 Score = 28.3 bits (60), Expect = 8.9 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = +1 Query: 211 KNFKQFPKSFNL----KQISLTKKCSQSINLVNQ*TNESRVVLKEYLVYKYKSS*KRIDL 378 +NF +F + KQ L ++ V Q + RVVL + + Y+YKS+ RI + Sbjct: 339 ENFSEFRNMVRVFDQSKQEILKNLRTRMSGFVVQNYDRLRVVLNDIVQYEYKSNAVRIHM 398 Query: 379 DHLECLNEIPL 411 D + + + P+ Sbjct: 399 DLIGQIRDAPI 409 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,908,533 Number of Sequences: 27780 Number of extensions: 436688 Number of successful extensions: 1049 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 997 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1048 length of database: 12,740,198 effective HSP length: 82 effective length of database: 10,462,238 effective search space used: 2563248310 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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