Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F21
(985 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15313-11|AAK68622.1| 208|Caenorhabditis elegans Hypothetical p... 144 1e-34
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 44 2e-04
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 44 2e-04
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 44 2e-04
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 31 1.3
U88170-8|AAB42244.1| 345|Caenorhabditis elegans Serpentine rece... 29 3.8
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 28 8.9
>L15313-11|AAK68622.1| 208|Caenorhabditis elegans Hypothetical
protein ZK353.9 protein.
Length = 208
Score = 144 bits (348), Expect = 1e-34
Identities = 70/159 (44%), Positives = 107/159 (67%)
Frame = +1
Query: 340 VYKYKSS*KRIDLDHLECLNEIPLEGSGKSVFKPWDKKNWIEAKFVESDTDEELLFNIPF 519
VY+Y ID++ + LNE ++G+GK VFK +K++ ++VESD D ELLFNIPF
Sbjct: 23 VYRYDMV-SYIDMEKVTTLNE-SVDGAGKKVFKVMEKRD-DRLEYVESDCDHELLFNIPF 79
Query: 520 TGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFELQKDTDGILEYCPK 699
TG+++L G+ + ++ SHP+K+RLFK+R M+FDD IE DQ +L++D G+++Y K
Sbjct: 80 TGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSFDDCSIEADQEIDLKQDPQGLVDYPLK 139
Query: 700 IVTFSSVSHLTMHFPKNFGAETTKIYYIGLKGEWTPSHR 816
F ++ +L++ NFG + TKIYYIGL+GE+ R
Sbjct: 140 ASKFGNIHNLSILVDANFGEDETKIYYIGLRGEFQHEFR 178
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Frame = +1
Query: 481 SDTDEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 654
SD DE+L+ ++PF +K+ I + +D P K+++F N P T FD+ +EP Q+
Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211
Query: 655 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 756
E + + G + K V F +V ++ N G
Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Frame = +1
Query: 481 SDTDEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 654
SD DE+L+ ++PF +K+ I + +D P K+++F N P T FD+ +EP Q+
Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211
Query: 655 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 756
E + + G + K V F +V ++ N G
Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Frame = +1
Query: 481 SDTDEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMT-FDD-VMIEPDQVF 654
SD DE+L+ ++PF +K+ I + +D P K+++F N P T FD+ +EP Q+
Sbjct: 153 SDCDEQLIISLPFNQPVKVHSILIKGV-SDRAPKKVKVFINLPKTTDFDNATALEPTQML 211
Query: 655 ELQKDT-DGILEYCP-KIVTFSSVSHLTMHFPKNFG 756
E + + G + K V F +V ++ N G
Sbjct: 212 EFDESSIQGHGQVVALKYVKFQNVQNIQFFIENNVG 247
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Frame = +1
Query: 370 IDLDHLECLNEIPLEGSGKSVF---KPWDKKNWIEA--KFVE-SDTDEELL 504
+D+DH ++ + + ++ KPW+K NW+EA +F+ S+T E++L
Sbjct: 4624 LDIDHEPFSKQVKMGQYDRMLYGNPKPWNKDNWVEACDQFLNYSNTKEDVL 4674
>U88170-8|AAB42244.1| 345|Caenorhabditis elegans Serpentine
receptor, class h protein49 protein.
Length = 345
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = -2
Query: 540 FKFYISSEWY---IKQQFFISITFNKFCFYPILF-VPRFKNTF 424
F + +SE+ K QFF+ + N F FY ILF P++ + F
Sbjct: 22 FSIFSTSEFLSFGAKSQFFVLVPINLFGFYCILFKTPKYMSEF 64
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +1
Query: 211 KNFKQFPKSFNL----KQISLTKKCSQSINLVNQ*TNESRVVLKEYLVYKYKSS*KRIDL 378
+NF +F + KQ L ++ V Q + RVVL + + Y+YKS+ RI +
Sbjct: 339 ENFSEFRNMVRVFDQSKQEILKNLRTRMSGFVVQNYDRLRVVLNDIVQYEYKSNAVRIHM 398
Query: 379 DHLECLNEIPL 411
D + + + P+
Sbjct: 399 DLIGQIRDAPI 409
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,908,533
Number of Sequences: 27780
Number of extensions: 436688
Number of successful extensions: 1049
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2563248310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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