Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F21
         (985 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    26   0.60 
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    24   1.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   2.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   2.4  
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    22   7.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   9.8  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    22   9.8  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.8 bits (54), Expect = 0.60
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNEIPLEGSGKSVFKPWDKKNWIEAKFVESDTDEEL 501
           KE+   +Y +  +RI++ H  CL E  ++   ++    W K+N  +      D D E+
Sbjct: 287 KEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKGTPGSGDGDTEI 344


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNEIPLEGSGKSVFKPWDKKN 456
           KE+   +Y +  +RI++ H  CL E  ++   ++    W K+N
Sbjct: 25  KEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 67


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 341 YTNTNLHEKELIWTT 385
           YT    H KEL+WT+
Sbjct: 795 YTFEQFHNKELLWTS 809


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 341 YTNTNLHEKELIWTT 385
           YT    H KEL+WT+
Sbjct: 833 YTFEQFHNKELLWTS 847


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 328 KEYLVYKYKSS*KRIDLDHLECLNE 402
           KE+   +Y +  +RI++ H  CL E
Sbjct: 25  KEFHFNRYLTRRRRIEIAHALCLTE 49


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 310 HWFIGLPN*LIENI 269
           HW   LPN ++ENI
Sbjct: 501 HWMPLLPNWILENI 514


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 712 SSVSHLTMHFPKNFGAETTKIYY 780
           SS+S+ T+H   N+     K+YY
Sbjct: 316 SSLSNKTIHNNNNYKNYNKKLYY 338


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,753
Number of Sequences: 438
Number of extensions: 5298
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32532591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)