BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_F21 (985 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g25950.1 68415.m03115 expressed protein 123 2e-28 At3g04780.1 68416.m00515 expressed protein 56 3e-08 At5g51850.1 68418.m06428 expressed protein similar to unknown pr... 30 2.7 At5g45095.1 68418.m05532 expressed protein 29 3.6 At3g47030.1 68416.m05107 F-box family protein contains F-box dom... 28 8.3 At3g46420.1 68416.m05032 leucine-rich repeat family protein / pr... 28 8.3 >At2g25950.1 68415.m03115 expressed protein Length = 204 Score = 123 bits (297), Expect = 2e-28 Identities = 64/153 (41%), Positives = 94/153 (61%), Gaps = 2/153 (1%) Frame = +1 Query: 364 KRIDLDHLECLNEIPLEGSGKSVFKPWDKKNWIEAKFVESDT-DEELLFNIPFTGNIKLK 540 K IDL + LNE + GS KSVFK W+++ + +ES+ D ELL +PFT ++K+K Sbjct: 22 KHIDLSKVSALNE-SVSGSAKSVFKAWEQRLHSSGEHLESNEGDPELLVFVPFTSDVKIK 80 Query: 541 GIKVASEDTDSHPSKLRLFKNRPNMTFDDV-MIEPDQVFELQKDTDGILEYCPKIVTFSS 717 I + + PSKLR+F NR + F D ++ Q +EL ++ G+LEY + F S Sbjct: 81 SISIVGGPEGTSPSKLRVFINREGIDFSDAESMQAVQEWELAENLQGVLEYQTRYSKFQS 140 Query: 718 VSHLTMHFPKNFGAETTKIYYIGLKGEWTPSHR 816 V ++T+HFP++FG +TT+I YIG KGE T R Sbjct: 141 VGNITLHFPESFGGDTTQIRYIGFKGEATQLKR 173 >At3g04780.1 68416.m00515 expressed protein Length = 176 Score = 56.4 bits (130), Expect = 3e-08 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 2/144 (1%) Frame = +1 Query: 370 IDLDHLECLNEIPLEGSGKSVFKPWDKKNWIEAKFVESDTDEELLFNIPFTGNIKLKGIK 549 ID +ECLN+ ++ + + + + +ESD DE+LL IPF IKL Sbjct: 20 IDWSGVECLNQSSSHSLPNALKQGYREDEGLN---LESDADEQLLIYIPFNQVIKLHSFA 76 Query: 550 VASEDTDSHPSKLRLFKNRPNMTFDDVM-IEPDQVFELQKDTDGILEYCPKIVTFSSVSH 726 + + + P ++ F N+ +M F +V P EL ++ K V F +V Sbjct: 77 IKGPEEEG-PKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVLKYVKFQNVRS 135 Query: 727 LTMHFPKN-FGAETTKIYYIGLKG 795 LT+ N G+E TK+ I L G Sbjct: 136 LTIFIEANQSGSEVTKVQKIALYG 159 >At5g51850.1 68418.m06428 expressed protein similar to unknown protein (emb|CAB81354.1) Length = 590 Score = 29.9 bits (64), Expect = 2.7 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +1 Query: 208 IKNFKQFPKSFNLKQISLTKKCSQSIN 288 IK FK+ PKS +L+ IS T+ Q IN Sbjct: 361 IKKFKKIPKSNDLENISATRPPHQQIN 387 >At5g45095.1 68418.m05532 expressed protein Length = 394 Score = 29.5 bits (63), Expect = 3.6 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -3 Query: 254 ICFKLKLLGNCLKFLIDXXPKEPIRTSLVCFNCFNFVFELDXKMTTHQFWRIFWI 90 +CFK+ L +CL L+D +R+ + CF F+ L + +F+ + WI Sbjct: 340 VCFKM-LFSSCLLALLD------LRSYYRIYLCFAFLNALSFDVLNSEFFELLWI 387 >At3g47030.1 68416.m05107 F-box family protein contains F-box domain Pfam:PF00646 Length = 414 Score = 28.3 bits (60), Expect = 8.3 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = +1 Query: 589 RLFKNRPNMTFDDVMIEPDQVFELQKDTDGILEYCPK---IVTFSSVS-HLTMHFPKNFG 756 ++ RP + F + + + +D D Y P +++S +S H MHFPK G Sbjct: 76 KMSSTRPRILFTFLYYGKRLFYSMPQDLDPSNHYSPLPYFSISYSPISAHYQMHFPKVLG 135 Query: 757 A 759 A Sbjct: 136 A 136 >At3g46420.1 68416.m05032 leucine-rich repeat family protein / protein kinase family protein contains leucine rich repeat (LRR) domains, INTERPRO:IPR001611; contains serine/threonine protein kinases active-site signature, Prosite:PS00108 Length = 838 Score = 28.3 bits (60), Expect = 8.3 Identities = 17/56 (30%), Positives = 23/56 (41%) Frame = +3 Query: 708 IFFSITSNNALSKELWGRNNKNLLHWIKRRMDT*S*AWVLPYAHMRVMPNLXDHKV 875 + + SN L L GRNN +L W R A L Y H+ P++ V Sbjct: 602 LVYEYMSNGDLKHHLSGRNNGFVLSWSTRLQIAVDAALGLEYLHIGCRPSMVHRDV 657 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,600,612 Number of Sequences: 28952 Number of extensions: 393229 Number of successful extensions: 933 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 902 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 931 length of database: 12,070,560 effective HSP length: 81 effective length of database: 9,725,448 effective search space used: 2392460208 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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