Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F18
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-53...    29   5.2  
06_03_0849 - 25344261-25344416,25344652-25344808,25344917-253450...    28   9.1  

>12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-538255,
            538601-538860,539950-540073,540978-541310,541447-541531,
            541683-541768,541843-541941,542041-542180,542717-543043,
            543163-543774,543887-543971,543972-544067,544147-544500,
            544536-544559,544597-544707,544811-544894,545468-545546,
            546122-546279,546412-546528,546622-546780,546857-546939,
            547525-547627,549184-549495
          Length = 1925

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = -1

Query: 615  SILLSTDPRQYS*LLTSSATYAAHADSSR**PASLHWTTYTAR-DTDGYSEESTLKGTLV 439
            S+LL  DP     +L+S   YA+  D+        HW    +R D     E    +G +V
Sbjct: 1398 SLLLDPDPASCRAVLSSLCQYASAQDAVAFLDKMCHWGISPSRSDYHAVFEALLQEGKVV 1457

Query: 438  SRRDLMRNK 412
               ++M+NK
Sbjct: 1458 EAYEVMKNK 1466


>06_03_0849 -
           25344261-25344416,25344652-25344808,25344917-25345056,
           25345160-25345295,25345392-25345663,25345809-25346068,
           25346716-25347035,25347287-25347352,25347439-25347510,
           25347609-25347680,25347776-25347858,25348068-25348139,
           25348389-25348485,25348918-25349050,25349158-25349236
          Length = 704

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +3

Query: 408 SIYYASNLFEILASLSRLTPRSNHPYPGLCRLSNGETLVI 527
           S+Y   N  E+++S+SRL   +  P  G C + +G+ L++
Sbjct: 431 SLYEEDNFLEVVSSISRLRHPNIVPLAGYC-VEHGQRLLV 469


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,218,732
Number of Sequences: 37544
Number of extensions: 425140
Number of successful extensions: 914
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)