Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F18
(924 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029512-1|AAH29512.1| 338|Homo sapiens phytanoyl-CoA 2-hydroxy... 46 3e-04
AL138764-5|CAI12911.2| 338|Homo sapiens phytanoyl-CoA 2-hydroxy... 46 3e-04
AF242386-1|AAF74123.1| 338|Homo sapiens phytanoyl-CoA hydroxyla... 46 3e-04
AF112977-1|AAD20602.1| 338|Homo sapiens phytanoil-CoA alpha hyd... 46 3e-04
AF023462-1|AAB81834.1| 338|Homo sapiens peroxisomal phytanoyl-C... 46 3e-04
AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA 2-hydroxy... 44 8e-04
AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA 2-hydroxy... 44 8e-04
CR542055-1|CAG46852.1| 338|Homo sapiens PHYH protein. 43 0.002
>BC029512-1|AAH29512.1| 338|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 338
Score = 45.6 bits (103), Expect = 3e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -3
Query: 910 NIIFHHTKAXYKPPEKG---AAYPMHPRLSXFPVRKR-LNXASFLHLDAADPKNGCLYVY 743
NI+ HT KPP+ G + +P+H L FP R L ++ ++ NGCL V
Sbjct: 150 NIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVL 209
Query: 742 PGSHKLDLR 716
PG+HK L+
Sbjct: 210 PGTHKGSLK 218
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 641 VIADRGDVVVFSYLLIHGSTPNYSHRPRRMLLMQTAAADDQRLSIGQPTQPGI 483
++ ++GD V F LLIHGS N + R+ + A+AD + + +Q I
Sbjct: 248 LVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENI 300
>AL138764-5|CAI12911.2| 338|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 338
Score = 45.6 bits (103), Expect = 3e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -3
Query: 910 NIIFHHTKAXYKPPEKG---AAYPMHPRLSXFPVRKR-LNXASFLHLDAADPKNGCLYVY 743
NI+ HT KPP+ G + +P+H L FP R L ++ ++ NGCL V
Sbjct: 150 NIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVL 209
Query: 742 PGSHKLDLR 716
PG+HK L+
Sbjct: 210 PGTHKGSLK 218
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 641 VIADRGDVVVFSYLLIHGSTPNYSHRPRRMLLMQTAAADDQRLSIGQPTQPGI 483
++ ++GD V F LLIHGS N + R+ + A+AD + + +Q I
Sbjct: 248 LVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENI 300
>AF242386-1|AAF74123.1| 338|Homo sapiens phytanoyl-CoA hydroxylase
protein.
Length = 338
Score = 45.6 bits (103), Expect = 3e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -3
Query: 910 NIIFHHTKAXYKPPEKG---AAYPMHPRLSXFPVRKR-LNXASFLHLDAADPKNGCLYVY 743
NI+ HT KPP+ G + +P+H L FP R L ++ ++ NGCL V
Sbjct: 150 NIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVL 209
Query: 742 PGSHKLDLR 716
PG+HK L+
Sbjct: 210 PGTHKGSLK 218
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 641 VIADRGDVVVFSYLLIHGSTPNYSHRPRRMLLMQTAAADDQRLSIGQPTQPGI 483
++ ++GD V F LLIHGS N + R+ + A+AD + + +Q I
Sbjct: 248 LVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENI 300
>AF112977-1|AAD20602.1| 338|Homo sapiens phytanoil-CoA alpha
hydroxylase protein.
Length = 338
Score = 45.6 bits (103), Expect = 3e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -3
Query: 910 NIIFHHTKAXYKPPEKG---AAYPMHPRLSXFPVRKR-LNXASFLHLDAADPKNGCLYVY 743
NI+ HT KPP+ G + +P+H L FP R L ++ ++ NGCL V
Sbjct: 150 NIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVL 209
Query: 742 PGSHKLDLR 716
PG+HK L+
Sbjct: 210 PGTHKGSLK 218
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 641 VIADRGDVVVFSYLLIHGSTPNYSHRPRRMLLMQTAAADDQRLSIGQPTQPGI 483
++ ++GD V F LLIHGS N + R+ + A+AD + + +Q I
Sbjct: 248 LVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENI 300
>AF023462-1|AAB81834.1| 338|Homo sapiens peroxisomal phytanoyl-CoA
alpha-hydroxylase protein.
Length = 338
Score = 45.6 bits (103), Expect = 3e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -3
Query: 910 NIIFHHTKAXYKPPEKG---AAYPMHPRLSXFPVRKR-LNXASFLHLDAADPKNGCLYVY 743
NI+ HT KPP+ G + +P+H L FP R L ++ ++ NGCL V
Sbjct: 150 NIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVL 209
Query: 742 PGSHKLDLR 716
PG+HK L+
Sbjct: 210 PGTHKGSLK 218
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 641 VIADRGDVVVFSYLLIHGSTPNYSHRPRRMLLMQTAAADDQRLSIGQPTQPGI 483
++ ++GD V F LLIHGS N + R+ + A+AD + + +Q I
Sbjct: 248 LVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENI 300
>AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 321
Score = 44.0 bits (99), Expect = 8e-04
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = -3
Query: 910 NIIFHHTKAXYKPPEKG-----AAYPMHPRLSXFPVRKR-LNXASFLHLDAADPKNGCLY 749
NI+ HT KPP+ G + +P+H L FP R L ++ ++ NGCL
Sbjct: 131 NIMAMHTMLINKPPDSGNCKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLV 190
Query: 748 VYPGSHKLDLR 716
V PG+HK L+
Sbjct: 191 VLPGTHKGSLK 201
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 641 VIADRGDVVVFSYLLIHGSTPNYSHRPRRMLLMQTAAADDQRLSIGQPTQPGI 483
++ ++GD V F LLIHGS N + R+ + A+AD + + +Q I
Sbjct: 231 LVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENI 283
>AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 296
Score = 44.0 bits (99), Expect = 8e-04
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = -3
Query: 910 NIIFHHTKAXYKPPEKG-----AAYPMHPRLSXFPVRKR-LNXASFLHLDAADPKNGCLY 749
NI+ HT KPP+ G + +P+H L FP R L ++ ++ NGCL
Sbjct: 168 NIMAMHTMLINKPPDSGNCKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLV 227
Query: 748 VYPGSHKLDLR 716
V PG+HK L+
Sbjct: 228 VLPGTHKGSLK 238
>CR542055-1|CAG46852.1| 338|Homo sapiens PHYH protein.
Length = 338
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = -3
Query: 910 NIIFHHTKAXYKPPEKG---AAYPMHPRLSXFPVR-KRLNXASFLHLDAADPKNGCLYVY 743
NI+ HT KPP+ G + +P+H L FP R L ++ ++ NGCL V
Sbjct: 150 NIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVL 209
Query: 742 PGSHKLDLR 716
P +HK L+
Sbjct: 210 PDTHKGSLK 218
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 641 VIADRGDVVVFSYLLIHGSTPNYSHRPRRMLLMQTAAADDQRLSIGQPTQPGI 483
++ ++GD V F LLIHGS N + R+ + A+AD + + +Q I
Sbjct: 248 LVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENI 300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,992,593
Number of Sequences: 237096
Number of extensions: 2396681
Number of successful extensions: 6703
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6695
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -