Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F18
         (924 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82287-6|CAB05318.1|  312|Caenorhabditis elegans Hypothetical pr...    44   2e-04
Z80223-9|CAB02322.1|  312|Caenorhabditis elegans Hypothetical pr...    44   2e-04
Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical pr...    42   6e-04
AL110479-7|CAB54355.1|  288|Caenorhabditis elegans Hypothetical ...    29   4.7  

>Z82287-6|CAB05318.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK550.6 protein.
          Length = 312

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = -3

Query: 910 NIIFHHTKAXYKPPEKG---AAYPMHPRLSXFPVRKR-LNXASFLHLDAADPKNGCLYVY 743
           N++  HT    KPP+ G   + +PMH  L  FP R       ++  ++     NGCL V 
Sbjct: 117 NLMAMHTMLINKPPDNGKLTSRHPMHQDLQYFPFRPADFICCAWTAMEKITRANGCLVVV 176

Query: 742 PGSHK 728
           PG+HK
Sbjct: 177 PGTHK 181


>Z80223-9|CAB02322.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK550.6 protein.
          Length = 312

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = -3

Query: 910 NIIFHHTKAXYKPPEKG---AAYPMHPRLSXFPVRKR-LNXASFLHLDAADPKNGCLYVY 743
           N++  HT    KPP+ G   + +PMH  L  FP R       ++  ++     NGCL V 
Sbjct: 117 NLMAMHTMLINKPPDNGKLTSRHPMHQDLQYFPFRPADFICCAWTAMEKITRANGCLVVV 176

Query: 742 PGSHK 728
           PG+HK
Sbjct: 177 PGTHK 181


>Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical
           protein ZK550.5 protein.
          Length = 328

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = -3

Query: 895 HTKAXYKPPEKGA---AYPMHPRLSXFPVR-KRLNXASFLHLDAADPKNGCLYVYPGSHK 728
           HT    KPP+ GA    +PMH  L  FP R + L   ++  ++  + +NGCL V PG+  
Sbjct: 138 HTMLINKPPDTGALTSRHPMHQDLIYFPWRPEELTVCAWTAMEKINKQNGCLQVVPGTQA 197

Query: 727 LDLR 716
             L+
Sbjct: 198 RGLQ 201


>AL110479-7|CAB54355.1|  288|Caenorhabditis elegans Hypothetical
           protein Y105C5B.9 protein.
          Length = 288

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 793 FLHLDAADPKNGCLYVYPGSHK 728
           ++ +D A  +NGCL   PGSHK
Sbjct: 167 WIAIDEASVENGCLSFIPGSHK 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,764,991
Number of Sequences: 27780
Number of extensions: 372749
Number of successful extensions: 768
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)