Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F16
(1020 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.052
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 35 0.12
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 34 0.16
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 34 0.16
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 34 0.21
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 34 0.21
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 32 0.85
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.85
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 31 1.5
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 31 1.5
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 2.0
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 31 2.0
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 30 3.4
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 6.0
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 29 7.9
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 7.9
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 37.9 bits (84), Expect = 0.013
Identities = 28/95 (29%), Positives = 30/95 (31%)
Frame = +1
Query: 631 PXXGPXRGPXXRKXGPPLXLGFFXXXRPPPPPGKXXYXNXXPRPXLKXGQXPPARXFXPX 810
P G P GPP +G PPPP G + P P PP P
Sbjct: 2125 PPMGQYGAPARPAMGPP-PMGSSRYG-PPPPMGPARHSPSGPSPLGAPPSVPPPMGAPPS 2182
Query: 811 XXXXPXRXKLPSXAXPXXXPAXAFPPXXRPPXLPP 915
P PS P P PP PP PP
Sbjct: 2183 GP--PPMGAPPSGPPPMGTPPSGHPPMGAPPMGPP 2215
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 35.9 bits (79), Expect = 0.052
Identities = 24/88 (27%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = +3
Query: 630 APXRPX-KGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRPXF-L 803
AP P P P PP ++ P PPPP P P P P P +
Sbjct: 138 APYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPP 197
Query: 804 XXSXPXXXPAXTPLPGXPXLXTRXRFPP 887
+ P P P P P PP
Sbjct: 198 PPNAPNPPPPNPPYPPPPNAPNPPYPPP 225
Score = 29.5 bits (63), Expect = 4.5
Identities = 22/102 (21%), Positives = 26/102 (25%)
Frame = +1
Query: 613 PXKKXXPXXGPXRGPXXRKXGPPLXLGFFXXXRPPPPPGKXXYXNXXPRPXLKXGQXPPA 792
P P P PP + PPPP P P PP
Sbjct: 133 PPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPN 192
Query: 793 RXFXPXXXXXPXRXKLPSXAXPXXXPAXAFPPXXRPPXLPPW 918
+ P P P P +PP P PP+
Sbjct: 193 PPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPN-PPY 233
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 34.7 bits (76), Expect = 0.12
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 642 PXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRP 794
P GP P PP G PPPPPP P P + G P P
Sbjct: 656 PEAGPPPP--PPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPP 704
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 34.3 bits (75), Expect = 0.16
Identities = 28/88 (31%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Frame = +3
Query: 648 KGPQXP*XRP--PAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTP-----RPXFLX 806
+GP P R PA PPPPPP + P P P L+ P +P
Sbjct: 296 QGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVP--LPPPPLRGQIAPPPPPISKPPTST 353
Query: 807 XSXPXXXPAXTPLP-GXPXLXTRXRFPP 887
S P P P P G P R PP
Sbjct: 354 RSAPPPPPGRAPQPLGGPPPPPPGRRPP 381
Score = 33.9 bits (74), Expect = 0.21
Identities = 39/151 (25%), Positives = 45/151 (29%), Gaps = 7/151 (4%)
Frame = +1
Query: 484 GPLSPXXPKXNXPPPGSXXWGXGXXPXIXXGXXGXSXKXXGXTPX----KKXXPXXGPXR 651
G P P PPP G G G P P P R
Sbjct: 163 GSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGR 222
Query: 652 GPXXRKXGPPLXLGFFXXXRPPPPPGKXXYXNXXPRP---XLKXGQXPPARXFXPXXXXX 822
GP R PP G P PPPG+ N P P G+ PP + P
Sbjct: 223 GPSQRSLAPP-PTG-SSRPLPAPPPGE----NRPPPPMRGPTSGGEPPPPKNAPPPPKRG 276
Query: 823 PXRXKLPSXAXPXXXPAXAFPPXXRPPXLPP 915
P P P+ +F + P LPP
Sbjct: 277 SSNPPPPPTRGP---PSNSF--TTQGPPLPP 302
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 34.3 bits (75), Expect = 0.16
Identities = 28/88 (31%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Frame = +3
Query: 648 KGPQXP*XRP--PAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTP-----RPXFLX 806
+GP P R PA PPPPPP + P P P L+ P +P
Sbjct: 208 QGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVP--LPPPPLRGQIAPPPPPISKPPTST 265
Query: 807 XSXPXXXPAXTPLP-GXPXLXTRXRFPP 887
S P P P P G P R PP
Sbjct: 266 RSAPPPPPGRAPQPLGGPPPPPPGRRPP 293
Score = 33.9 bits (74), Expect = 0.21
Identities = 39/151 (25%), Positives = 45/151 (29%), Gaps = 7/151 (4%)
Frame = +1
Query: 484 GPLSPXXPKXNXPPPGSXXWGXGXXPXIXXGXXGXSXKXXGXTPX----KKXXPXXGPXR 651
G P P PPP G G G P P P R
Sbjct: 75 GSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGR 134
Query: 652 GPXXRKXGPPLXLGFFXXXRPPPPPGKXXYXNXXPRP---XLKXGQXPPARXFXPXXXXX 822
GP R PP G P PPPG+ N P P G+ PP + P
Sbjct: 135 GPSQRSLAPP-PTG-SSRPLPAPPPGE----NRPPPPMRGPTSGGEPPPPKNAPPPPKRG 188
Query: 823 PXRXKLPSXAXPXXXPAXAFPPXXRPPXLPP 915
P P P+ +F + P LPP
Sbjct: 189 SSNPPPPPTRGP---PSNSF--TTQGPPLPP 214
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.9 bits (74), Expect = 0.21
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAP 761
P P P PQ P PP PPPPPP P P P
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 33.9 bits (74), Expect = 0.21
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPR 791
P P P P P PP PPPP P P P P L+ PR
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAPPR 442
Query: 792 PXF 800
F
Sbjct: 443 LRF 445
Score = 33.5 bits (73), Expect = 0.28
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPR 791
P P P P P PP+ PPPPPP P P P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 792 P 794
P
Sbjct: 425 P 425
Score = 33.5 bits (73), Expect = 0.28
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +1
Query: 712 PPPPPGKXXYXNXXPRPXLKXGQXPPARXFXPXXXXXPXRXKLPSXAXPXXXPAXAFPPX 891
PPPPP + P P PP P P P P PA PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Query: 892 XRPPXLP 912
PP P
Sbjct: 426 PPPPPPP 432
Score = 33.1 bits (72), Expect = 0.37
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +1
Query: 712 PPPPPGKXXYXNXXPRPXLKXGQXPPARXFXPXXXXXPXRXKLPSXAXPXXXPAXAFPPX 891
PPPPP P P PP + P P P P P A PP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQ---PPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Query: 892 XRPPXLPP 915
PP PP
Sbjct: 424 PPPPPPPP 431
Score = 33.1 bits (72), Expect = 0.37
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPR 791
P P P P P PP PPPPPP P P P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Query: 792 P 794
P
Sbjct: 428 P 428
Score = 32.7 bits (71), Expect = 0.49
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 708 PPPPPPXKXXXPXXXPAPXLKXGXXTPRPXFLXXSXPXXXPAXTPLPGXP 857
PPPPPP P P P P P P PA P P P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 32.3 bits (70), Expect = 0.65
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +3
Query: 675 PPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRPXFLXXSXPXXXPAXTPLPGX 854
PP PPPPPP P P P P P P P P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 855 PXLXTRXRFPP 887
P R P
Sbjct: 430 PPPALRLACAP 440
Score = 31.9 bits (69), Expect = 0.85
Identities = 24/86 (27%), Positives = 25/86 (29%)
Frame = +3
Query: 630 APXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRPXFLXX 809
+P P P P PP PPPPPP P P P P P
Sbjct: 364 SPPPPPPPPPPPPSPPPP--------PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Query: 810 SXPXXXPAXTPLPGXPXLXTRXRFPP 887
P P P P P PP
Sbjct: 416 PPPAPPPPPPPPPPPPPALRLACAPP 441
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPR 791
P P P P P PP PPPPPP P P P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 792 P 794
P
Sbjct: 429 P 429
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.9 bits (74), Expect = 0.21
Identities = 19/76 (25%), Positives = 23/76 (30%)
Frame = +3
Query: 630 APXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRPXFLXX 809
+P P P PP PPPPPP P P + P P
Sbjct: 125 SPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLA 184
Query: 810 SXPXXXPAXTPLPGXP 857
+ P+ P P P
Sbjct: 185 AASPPPPSGGPPPPPP 200
Score = 32.3 bits (70), Expect = 0.65
Identities = 25/83 (30%), Positives = 27/83 (32%), Gaps = 1/83 (1%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPR 791
P AP P + P P PP PPPPPP P P + P
Sbjct: 110 PPPPPRAPETPSQAPSPP--PPPTSPAT--RAPPPPPPIAPATGGPPPPPPIAPATGGPP 165
Query: 792 PXFLXXSXPXXXPAXT-PLPGXP 857
P P PA T P P P
Sbjct: 166 P------PPPIAPAATVPAPAVP 182
Score = 31.9 bits (69), Expect = 0.85
Identities = 24/85 (28%), Positives = 26/85 (30%)
Frame = +3
Query: 633 PXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRPXFLXXS 812
P P P PP PPPPPP PAP + +P P
Sbjct: 139 PPPPPIAPATGGPPPPPPIAPATGGPPPPPP--IAPAATVPAPAVPLAAASPPPP--SGG 194
Query: 813 XPXXXPAXTPLPGXPXLXTRXRFPP 887
P P P P P L PP
Sbjct: 195 PPPPPPPPPPPPPPPILELAAPPPP 219
Score = 29.5 bits (63), Expect = 4.5
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Frame = +1
Query: 712 PPPPPGKXXYXNXXPRPXLKX--GQXPPARXFXPXXXXXPXRXKLPSXAXPXXXPAXAFP 885
PPPPP P P + G PP P L + + P P
Sbjct: 139 PPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPP 198
Query: 886 PXXRPPXLPP 915
P PP PP
Sbjct: 199 PPPPPPPPPP 208
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 32.3 bits (70), Expect = 0.65
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Frame = +3
Query: 654 PQXP*XRPPAXXGVFXXXPPP----PPPXKXXXPXXXPAPXLKXGXXTPR 791
PQ P PP G+ PPP PPP P P P G PR
Sbjct: 452 PQLPPNLPPPPGGMRGMPPPPMGMYPPPRGFPPPPFGPPPPFYRGPPPPR 501
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.9 bits (69), Expect = 0.85
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAP 761
P + P P +G P A V PPPPPP P P P
Sbjct: 331 PSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPP 380
Score = 29.1 bits (62), Expect = 6.0
Identities = 24/91 (26%), Positives = 28/91 (30%)
Frame = +1
Query: 631 PXXGPXRGPXXRKXGPPLXLGFFXXXRPPPPPGKXXYXNXXPRPXLKXGQXPPARXFXPX 810
P G P R PP PPPPP + + P P + PP+ P
Sbjct: 300 PSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSR---SSQRPPPPSRGAPPPPSMGMAP- 355
Query: 811 XXXXPXRXKLPSXAXPXXXPAXAFPPXXRPP 903
P P P P PP PP
Sbjct: 356 ---PPVGGAAP---PPPPPPPVGGPPPPPPP 380
Score = 28.7 bits (61), Expect = 7.9
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXP--XXXPAPXLKXGXXT 785
P AP P G P PP G PPPPPP + P P P G
Sbjct: 348 PPSMGMAPP-PVGGAAPPPPPPPPVGG----PPPPPPPIEGRPPSSLGNPPPPPPPGRGA 402
Query: 786 PRP 794
P P
Sbjct: 403 PPP 405
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.9 bits (69), Expect = 0.85
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXP 755
P K P P GP P PP G PPPPPP P P
Sbjct: 370 PTNKPPPPPPPTNGPPPP---PPPTNG----PPPPPPPTNGPPPPPPP 410
Score = 29.5 bits (63), Expect = 4.5
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +3
Query: 654 PQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRPXFLXXSXPXXXPA 833
P P PP+ PPPPPP P P P P P P
Sbjct: 347 PPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPT-----NGPPPPPPPTNGPPPPPPPT 401
Query: 834 XTPLPGXP 857
P P P
Sbjct: 402 NGPPPPPP 409
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Frame = +1
Query: 712 PPPPPGKXXYXNXXPRPXLKXGQXPPARXFXPXXXXXPXRXKLP--SXAXPXXXPAXAFP 885
PPPPPG P Q PP P P P A P P
Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSA 981
Query: 886 PXXRPPXLPPWEXXRAL 936
P PP PP R L
Sbjct: 982 PPPPPPPPPPPPPMRKL 998
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/78 (25%), Positives = 25/78 (32%)
Frame = +3
Query: 618 KKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRPX 797
++ +P + G + P PP PPPPPP P P P P P
Sbjct: 895 RRNESPSQTPGGSESPSASPPGGS-----VPPPPPPPGGNAPLPPPPPGGSAPSQPPPPG 949
Query: 798 FLXXSXPXXXPAXTPLPG 851
P P PG
Sbjct: 950 GNAPPPPPPPGGSAPPPG 967
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 708 PPPPPPXKXXXPXXXPAPXLKXGXXTPRPXFLXXSXPXXXPA-XTPLPGXPXL 863
PPPPPP + P P + P P + P PA P P P L
Sbjct: 923 PPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPATQVPPPPLPPL 975
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +1
Query: 823 PXRXKLPSXAXPXXXPAXAFPPXXRPPXLPPWEXXRALXPLTXT 954
P K + A P P PP PP PP + R P T T
Sbjct: 898 PTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPT 941
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 4/76 (5%)
Frame = +3
Query: 633 PXRPXKGP---QXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXT-PRPXF 800
P P + P P PP+ V PPPPP P P P + T P P
Sbjct: 36 PPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTDAPTTVPPPVV 95
Query: 801 LXXSXPXXXPAXTPLP 848
P T P
Sbjct: 96 TDAPTTVPPPVVTDAP 111
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +3
Query: 651 GPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRP 794
G P PP G PPPPPP P P P P P
Sbjct: 286 GGGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPP 333
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 633 PXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAP 761
P P P PP PPPPPP P P P
Sbjct: 295 PPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 675 PPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRP 794
PPA PPPPP P P P G P P
Sbjct: 295 PPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPP 334
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 654 PQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXG 776
P P PP G PPPPPP P P + G
Sbjct: 695 PPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPG 735
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 633 PXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAP 761
P P G P PP G+F PPPPP P P P
Sbjct: 644 PPNPFFGGIPP---PPPGGGMFPPPPPPPPGGGVPGPPKPPPP 683
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = +3
Query: 642 PXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXP-APXLKXGXXTPRPXFLXXSXP 818
P + PQ PP + PPP P P P A G PR S P
Sbjct: 340 PPRAPQGASQTPPYPGSHYSRVPPPDGPYTRALPPGEPYARMPPPGATHPRVPSPGASHP 399
Query: 819 XXXPAXTPLPGXP 857
P P P P
Sbjct: 400 RVPPPGAPHPRVP 412
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = +3
Query: 630 APXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXL-KXGXXTPRPXFLX 806
AP + P P R P PPP P P P P + G PR
Sbjct: 496 APHQRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPG 555
Query: 807 XSXPXXXPAXTPLPGXPXLXT-RXRFPP 887
S P P P P P R PP
Sbjct: 556 ASHPRVPPPGAPHPRVPPPGAPHPRVPP 583
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*X--RPPAXXGVFXXXPPPPPPXKXXXPXXXPAP 761
P AP P P P PPA P PPPP P PAP
Sbjct: 58 PAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAP 109
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +3
Query: 708 PPPPPPXKXXXPXXXPAPXLKXGXXTPRPXFLXXSXPXXXPAXTPLPGXP 857
PPPPPP P P P P + P P PLP P
Sbjct: 50 PPPPPPSPPAAAPAAPPPPAAAPAAPPPP----AAPPAAPPPPPPLPAPP 95
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +1
Query: 709 RPPPPPGKXXYXNXXPRPXLKXGQXPPARXFXPXXXXXPXRXKLPSXAXPXXXPAXAFPP 888
+PP P K P P L+ A P P P P PA A PP
Sbjct: 422 KPPAPLPKAHNEKIAPLPSLRAS----AATLPPLPSDEPPPLP-PDEEKPPPPPAPALPP 476
Query: 889 XXRPPXLP 912
PP LP
Sbjct: 477 LPLPPELP 484
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +3
Query: 612 PXKKXXAPXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXG 776
P P P P P RPP PPPPPP K P P + G
Sbjct: 779 PPPPPTKPATPRVPPNIP-SRPPGARPT----PPPPPPGKPTKPTKPSLPPVPPG 828
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 606 PPXFXGXPXXPPXDXXXXPXPPXXGPGGGRIXFGXXGXKGP 484
PP F G P PP P PP P G G GP
Sbjct: 1246 PPKFMGLPPPPPGMRPMPPQPPFMPPPPRMQPPGPPGPPGP 1286
>SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 633 PXRPXKGPQXP*XRPPAXXGVFXXXPPPPPP 725
P +P PQ P PA G+ PPPPPP
Sbjct: 67 PGQPQVTPQTP---SPASPGLPFMPPPPPPP 94
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/87 (24%), Positives = 26/87 (29%)
Frame = +1
Query: 613 PXKKXXPXXGPXRGPXXRKXGPPLXLGFFXXXRPPPPPGKXXYXNXXPRPXLKXGQXPPA 792
P +K P P + PP + +P PPP + P P PP
Sbjct: 1029 PKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPP 1088
Query: 793 RXFXPXXXXXPXRXKLPSXAXPXXXPA 873
R P P P P PA
Sbjct: 1089 RQPDP-IPTNPAHPTEPPPRQPKPTPA 1114
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 654 PQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXPAPXLKXGXXTPRP 794
P P P PPPPPP P P P + P P
Sbjct: 283 PPPPPSNTPGMFASSGFQPPPPPPTDFAPPPPPPEPTSELPPPPPPP 329
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 633 PXRPXKGPQXP*XRPPAXXGVFXXXPPPPPPXKXXXPXXXP 755
P +P P PP G PPPPPP P P
Sbjct: 201 PGQPGMWGPPPMGGPPPMGGPPGGYPPPPPPPGAGDPAYPP 241
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +3
Query: 708 PPPPPPXKXXXPXXXPAPXLKXGXXTPRPXFLXXSXP--XXXPAXTPLPGXP 857
PPPPPP P P P P P P P P+P P
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMP 255
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.143 0.474
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,403,979
Number of Sequences: 59808
Number of extensions: 193677
Number of successful extensions: 1581
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3035492608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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