Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F15
(1209 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 32 1.1
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 5.6
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 29 7.4
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 7.4
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 9.8
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.8
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 9.8
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP+ PPP SPPP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPP 391
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P S PPP PPP PPP
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPP 407
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P+P PPP PPP PPP
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPP 400
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPP 408
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP +PPP
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 393 PQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 399 PPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 400 PPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 401 PPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 402 PPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 406 PPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 407 PPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 408 PPPPPPPPPPPAPPPPPPPPPPPPP 432
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPPN PPP PPP
Sbjct: 103 PPPPPYPPPPNPPYPPPPNAPYPPP 127
Score = 30.3 bits (65), Expect = 3.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP + PPP PPP
Sbjct: 96 PPPYPPYPPPPPYPPPPNPPYPPPP 120
Score = 29.1 bits (62), Expect = 7.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 1150 PPPNXHXPPPXXXXSPPP 1203
PPPN PPP +PPP
Sbjct: 189 PPPNPPYPPPPNAPNPPP 206
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +1
Query: 1129 PAPXXSXPP-PNXHXPPPXXXXSPPPL 1206
P P PP PN PPP PPPL
Sbjct: 134 PPPNAPYPPSPNAPYPPPPNPPYPPPL 160
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 1135 PXXSXPPPNXHXPPPXXXXSPPP 1203
P PPPN PPP PPP
Sbjct: 176 PPPYPPPPNPPYPPPPNPPYPPP 198
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/65 (26%), Positives = 22/65 (33%)
Frame = +3
Query: 1014 AQXTPAPXXXXXTXVPXPPAXSADAXTFXPRXAR*PERSXSXXIXPPPKXTXPTPTXXXL 1193
A P P P PP +A P + P + + PPP + P P
Sbjct: 930 APLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPP 989
Query: 1194 TTPPP 1208
PPP
Sbjct: 990 PPPPP 994
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 1123 RDPAPXXSXPPPNXHXPPPXXXXSPPP 1203
R P P PPP PPP PPP
Sbjct: 858 RRPRPRPRRPPPPPPPPPPPPPPPPPP 884
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP+ PPP PPP
Sbjct: 1159 PPPPPPPPPPSSPSPPPPPPPPPPP 1183
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP +PPP
Sbjct: 684 PPPPPPPPPPPPPPPPPPQPSTPPP 708
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 685 PPPPPPPPPPPPPPPPPQPSTPPPP 709
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 483 PPPPFGPPPPFYRGPPPPRGMPPPP 507
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.5 bits (63), Expect = 5.6
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 5/66 (7%)
Frame = +3
Query: 1026 PAPXXXXXTXVPXPPAXSADAXTFXP-----RXAR*PERSXSXXIXPPPKXTXPTPTXXX 1190
P P T P PP A A T A P S PPP P P
Sbjct: 153 PPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPPPILE 212
Query: 1191 LTTPPP 1208
L PPP
Sbjct: 213 LAAPPP 218
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +1
Query: 1090 GXSXXGXXDNQRDPAPXX--SXPPPNXHXPPPXXXXSPPP 1203
G + G N DP P + PP + PPP +PPP
Sbjct: 1005 GPTNPGTTTNVPDPLPTDPPTEPPTDPPTPPPTEPPTPPP 1044
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 1120 QRDPAPXXSXPPPNXHXPPPXXXXSPPPL 1206
Q+ P PPP + PPP PPP+
Sbjct: 72 QQQPMMMPFPPPPPIYMPPPPVYMPPPPV 100
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPP 1200
P P PPP+ PPP SPP
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPP 227
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 468 PPPPPPPPPPPPPPPPPPPPFPPPP 492
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 469 PPPPPPPPPPPPPPPPPPPFPPPPP 493
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1129 PAPXXSXPPPNXHXPPPXXXXSPPP 1203
P P PPP PPP PPP
Sbjct: 470 PPPPPPPPPPPPPPPPPPFPPPPPP 494
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 1114 DNQRDPAPXXSXPPPNXHXPPPXXXXSPPPL 1206
D+ DP P PPP PPP PL
Sbjct: 49 DDDHDPPPPPPPPPPPPPPPPPPSSSPSRPL 79
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +1
Query: 1117 NQRDPAPXXSXPPPNXHX--PPPXXXXSPPP 1203
+QR P P PPP PPP +PPP
Sbjct: 335 SQRPPPPSRGAPPPPSMGMAPPPVGGAAPPP 365
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,070,186
Number of Sequences: 59808
Number of extensions: 177903
Number of successful extensions: 1196
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 3751632030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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