Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F14
         (899 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16796| Best HMM Match : Multi_Drug_Res (HMM E-Value=0.96)           35   0.078

>SB_16796| Best HMM Match : Multi_Drug_Res (HMM E-Value=0.96)
          Length = 725

 Score = 35.1 bits (77), Expect = 0.078
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 147 AFLXMRERSSFYASWXTQRSIR-SPANFQGQSDTLAIFTTLSLGTGKWGEGRSSGLWERA 323
           A + M     FY+     RS   +PA   G   ++   TTL+L      + RSSG +  A
Sbjct: 417 ALVVMGSSLWFYSLTKETRSATYAPAIMSGCGTSIMFVTTLALAAELVDQDRSSGAFVMA 476

Query: 324 TKDFLVKVVITGXFF 368
           +  FL K+V+   FF
Sbjct: 477 SMSFLSKIVLGTLFF 491


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,041,380
Number of Sequences: 59808
Number of extensions: 470875
Number of successful extensions: 1131
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)