BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F13
(935 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.75
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 32 0.75
07_01_0080 + 587674-588510 32 0.75
06_01_0254 + 1898586-1899617 32 0.75
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 32 0.75
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 32 0.75
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 31 1.00
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 31 1.3
08_01_0059 - 394001-394708 29 5.3
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.3
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 5.3
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 7.0
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 29 7.0
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 7.0
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 7.0
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 7.0
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 7.0
05_03_0626 - 16335816-16335917,16336331-16336558,16336694-163369... 29 7.0
04_01_0034 - 401208-402923 29 7.0
12_02_1174 - 26696869-26698191 28 9.3
09_03_0145 - 12749288-12751510 28 9.3
07_01_0862 - 7172083-7172931 28 9.3
06_03_0790 - 24636805-24637770 28 9.3
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 28 9.3
03_05_0630 + 26260159-26260272,26260520-26260894 28 9.3
02_04_0400 - 22608519-22608844,22609044-22609122 28 9.3
01_06_0357 - 28668894-28669238,28669510-28669537,28669578-286696... 28 9.3
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPP 572
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPP 573
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPPPP 574
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPP 605
PP PPPP P PP PP
Sbjct: 568 PPPPPPPLPQSNYASSQPPPPPPPPP 593
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPP 605
PP PPPP P PP PP
Sbjct: 585 PPPPPPPPPLPNCLVPSPPPPPPPPP 610
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPP 605
PP PPPP P PP PP
Sbjct: 618 PPPPPPPPPLPNHSVLPPPPPPPPPP 643
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 679 PXPPPPXXXXXXXXXXPXPPXXXPPP 602
P PPPP P PP PPP
Sbjct: 618 PPPPPPPPPLPNHSVLPPPPPPPPPP 643
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP PP PPP
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPP 571
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP PP PPP
Sbjct: 566 PPPPPPPPPLPQSNYASSQPPPPPPPP 592
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP PP PPP
Sbjct: 567 PPPPPPPPLPQSNYASSQPPPPPPPPP 593
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P P PPP
Sbjct: 689 PPPPPPPPLPPANRTNGPGVPSAPPPP 715
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 92 PPPPPPPYGVNSSQPPPPPPPPPSPPP 118
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 107 PPPPPPPPSPPPSAPPPPPPPPTQPPP 133
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PP
Sbjct: 106 PPPPPPPPPSPPPSAPPPPPPPPTQPP 132
>07_01_0080 + 587674-588510
Length = 278
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPPPP 117
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 92 PPPPPPPPSSGSPPPPPPPPPPPPPPP 118
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPPPP 119
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPP P PP PPP
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPPPPPP 120
>06_01_0254 + 1898586-1899617
Length = 343
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 470 GGGGGGXXXSPPXXXXPPPP 411
GGGGGG PP PPPP
Sbjct: 74 GGGGGGKIALPPFTQPPPPP 93
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 354 PPPPPPPPPPPPKLNTAPKPPPPPPPP 380
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPP 605
PP PPPP P PP PP
Sbjct: 356 PPPPPPPPPPKLNTAPKPPPPPPPPP 381
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP PP PPP
Sbjct: 355 PPPPPPPPPPPKLNTAPKPPPPPPPPP 381
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 31.9 bits (69), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 119 PPPPPPPHPPEDPPPHPPHPPDHPPPP 145
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPP P PP PPP
Sbjct: 127 PPEDPPPHPPHPPDHPPPPPPCRVPPP 153
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 31.5 bits (68), Expect = 1.00
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 470 GGGGGGXXXSPPXXXXPPP 414
GGGGGG SPP PPP
Sbjct: 22 GGGGGGGMGSPPLGPPPPP 40
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 470 GGGGGGXXXSPPXXXXPPPP 411
GGGGGG SP PPPP
Sbjct: 21 GGGGGGGGFSPTAAKPPPPP 40
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 494 KKIXFFXXGGGGGGXXXSPPXXXXPPPP 411
K + GGGGGG P PPPP
Sbjct: 12 KSVKSSSTGGGGGGGGGFSPTAAKPPPP 39
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 679 PXPPPPXXXXXXXXXXPXPPXXXPPP 602
P PPPP P PP PPP
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPP 27
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 679 PXPPPPXXXXXXXXXXPXPPXXXPPP 602
P PPPP P PP PPP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPP 338
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P P PPP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPP 339
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPP 605
PP PPPP P PP PP
Sbjct: 354 PPPPPPPPPPPPPPPPPPRPPPPPPP 379
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P P PPP
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPPP 379
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
P PPPP P PP PPP
Sbjct: 329 PAPPPPPPPPSRFNNTTPKPPPPPPPP 355
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP P P
Sbjct: 331 PPPPPPPPSRFNNTTPKPPPPPPPPEP 357
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PP
Sbjct: 332 PPPPPPPSRFNNTTPKPPPPPPPPEPP 358
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 683 PPXPPPPXXXXXXFXXXPLPPXXAPP 606
PP PPPP F PP PP
Sbjct: 55 PPPPPPPPAPFFPFLPDSAPPQLPPP 80
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP P P
Sbjct: 221 PPPPPPPPSPHRHPAAHPPPPPHHPAP 247
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 470 GGGGGGXXXSPPXXXXPPPP 411
GGGGGG +PP PPPP
Sbjct: 34 GGGGGGAGPTPP--PPPPPP 51
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPP P PP PPP
Sbjct: 232 PPPPPPKPANIAGAPGLPLPPPPPPPP 258
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 692 KXXPPXPPPPXXXXXXFXXXPLPPXXAPP 606
K PP PPP P PP APP
Sbjct: 1924 KQPPPHAPPPPPPPPPVEGKPKPPPHAPP 1952
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPP P PP PPP
Sbjct: 1927 PPHAPPPPPPPPPVEGKPKPPPHAPPP 1953
>05_03_0626 -
16335816-16335917,16336331-16336558,16336694-16336973,
16337596-16338560
Length = 524
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 470 GGGGGGXXXSPPXXXXPPPP 411
GGGGGG PP PPP
Sbjct: 78 GGGGGGLAFLPPTIFPSPPP 97
>04_01_0034 - 401208-402923
Length = 571
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPP P PP PPP
Sbjct: 307 PPPPPPQQQRAKPSRPPPPPPPLDPPP 333
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPP P PP PPP
Sbjct: 137 PPHRPPPVKPQPPPSLPPPPPPPPPPP 163
>09_03_0145 - 12749288-12751510
Length = 740
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P P PPP
Sbjct: 30 PPPPPPPPGIQPPPPALPGMPHGRPPP 56
>07_01_0862 - 7172083-7172931
Length = 282
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 692 KXXPPXPPPPXXXXXXFXXXPLPPXXAPP 606
K PP PPP PLPP PP
Sbjct: 181 KPLPPPSPPPQPPLPEKENTPLPPLLLPP 209
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 603 GGGXXXGGXGXXXKXXXXXXGGGGXGG 683
GGG GG G + GGGG GG
Sbjct: 108 GGGGGGGGGGGGGRGGGGGGGGGGGGG 134
>04_03_0977 +
21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 470 GGGGGGXXXSPPXXXXPPPP 411
G GGGG PP PPPP
Sbjct: 91 GVGGGGWVQLPPPPPPPPPP 110
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 603 GGGXXXGGXGXXXKXXXXXXGGGGXGG 683
GGG GG G + GGGG GG
Sbjct: 109 GGGYGGGGGGGYGRREGGYGGGGGYGG 135
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 603 GGGXXXGGXGXXXKXXXXXXGGGGXGG 683
GGG GG G + GGGG GG
Sbjct: 51 GGGGGGGGGGGGGRGGGGGGGGGGGGG 77
>01_06_0357 -
28668894-28669238,28669510-28669537,28669578-28669635,
28669836-28669916,28670395-28670526,28670609-28670926,
28672495-28673317
Length = 594
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -1
Query: 683 PPXPPPPXXXXXXFXXXPLPPXXAPP 606
PP PP P PLPP +PP
Sbjct: 9 PPPPPSPPRLPLTAHRLPLPPATSPP 34
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,298,274
Number of Sequences: 37544
Number of extensions: 327612
Number of successful extensions: 6168
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3704
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -