Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F13
(935 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.68
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.7
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 4.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.8
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 4.8
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 4.8
U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (gr... 29 6.3
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.68
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP P PP PPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPP 93
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 692 KXXPPXPPPPXXXXXXFXXXPLPPXXAPP 606
K PP PPPP P PP PP
Sbjct: 64 KATPPPPPPPPPLISILQQAPPPPPPPPP 92
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 470 GGGGGGXXXSPPXXXXPPPP 411
GGGGGG + P PPPP
Sbjct: 26 GGGGGGCAPAAPACAPPPPP 45
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 470 GGGGGGXXXSPPXXXXPPPP 411
GGGGGG P PPPP
Sbjct: 82 GGGGGGGYGRPQGYVPPPPP 101
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPP 605
PP PPPP P PP PP
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP PP PPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPP 637
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP PP PPP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP PP PPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPP 605
PP PPPP P PP PP
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP PP PPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPP 463
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP PP PPP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 682 PPXPPPPXXXXXXXXXXPXPPXXXPPP 602
PP PPPP PP PPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPP 482
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 679 PXPPPPXXXXXXXXXXPXPPXXXPPP 602
P PPPP P PP PPP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPP 521
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 679 PXPPPPXXXXXXXXXXPXPPXXXPPP 602
P PPPP P PP PPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPP 1363
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -1
Query: 506 GXPXKKIXFFXXGGGGGGXXXSPPXXXXPPPP 411
G P + GGGGG +P PPPP
Sbjct: 38 GAPPCSSSSYATGGGGGSYAAAPALPPPPPPP 69
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -1
Query: 506 GXPXKKIXFFXXGGGGGGXXXSPPXXXXPPPP 411
G P + GGGGG +P PPPP
Sbjct: 38 GAPPCSSSSYATGGGGGSYAAAPALPPPPPPP 69
>U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (grd
related) protein10 protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 482 FFXXGGGGGGXXXSPPXXXXPPPP 411
FF GGGG +P PPPP
Sbjct: 23 FFGAAGGGGACGCAPRPACPPPPP 46
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 482 FFXXGGGGGGXXXSPPXXXXPPPP 411
FF GGGG P PPPP
Sbjct: 22 FFFGAAGGGGACGCAPRPACPPPP 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,092,240
Number of Sequences: 27780
Number of extensions: 185991
Number of successful extensions: 2097
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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