Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F12
(956 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 31 1.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.8
07_01_0080 + 587674-588510 30 3.1
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.1
02_05_0686 - 30900748-30902167,30903442-30904742 29 7.2
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 29 7.2
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 9.6
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 9.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 9.6
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 28 9.6
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 543 GKPXXRXWGXGXXFPXPKNRGXGVXXGGXGXGAPKXNXLXPGGGG 409
G P G G P RG G GG G G P GGGG
Sbjct: 36 GAPYSGGRGRGQDGSYPGGRGGGYGGGGGGGGPPYYGGGGGGGGG 80
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 410 PPPPGXXXXXFGAPXPXPPXXTPXPRFLGXGNXXPXPQXRXXGXPXXRGXPXXK 571
PPPP P P P P G G P P G P RG P K
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPA-LPGGPRARGPPPFK 402
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +2
Query: 410 PPPPGXXXXXFGA----PXPXPPXXTPXPRFLGXGNXXPXP 520
PPPP GA P P PP PR G G P P
Sbjct: 333 PPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPP 373
>07_01_0080 + 587674-588510
Length = 278
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 404 KNPPPPGXXXXXFGAPXPXPPXXTPXP 484
+ PPPP G+P P PP P P
Sbjct: 89 RRPPPPPPPPPSSGSPPPPPPPPPPPP 115
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 407 NPPPPGXXXXXFGAPXPXPPXXTPXPRFLGXGNXXPXPQXRXXGXP 544
+PPPP G PP P P LG P P G P
Sbjct: 1064 SPPPPQRENTSVGIQGGIPPLPPPLPPTLGDYGVAPPPPSIGAGAP 1109
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 7.2
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +2
Query: 410 PPPPGXXXXXFGAPXPXPPXXTPXPRFLGXGNXXPXPQXRXXGXPXXRGXPXXKP 574
PPPP AP P PP P G P P P +G P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = +2
Query: 443 GAPXPXPPXXTPXPRFLGXGNXXPXPQXRXXGXPXXRGXP----XXKPXXXRAPXRAXNP 610
G P P PP +P P P P+ R P KP AP
Sbjct: 51 GPPPPPPPSPSPSPSPPAGKPTKPHPESTPPTKTPARSKPAAAAAEKPRPSVAPESTNGG 110
Query: 611 *KGPXWWL 634
G WWL
Sbjct: 111 GGGEHWWL 118
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 410 PPPPGXXXXXFGAPXPXPPXXTPXPRFLGXGN 505
PPPPG G P P PP PR L G+
Sbjct: 627 PPPPGKP----GGPPPPPPRPGSLPRNLAGGD 654
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 410 PPPPGXXXXXFGAPXPXPPXXTPXPRFLGXGN 505
PPPPG G P P PP PR L G+
Sbjct: 932 PPPPGKP----GGPPPPPPPPGSLPRNLAGGD 959
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +2
Query: 410 PPPPGXXXXXFGAPXPXPPXXTPXPRFLGXGNXXPXPQXRXXGXP 544
PPPP P P PP P PR P Q P
Sbjct: 109 PPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPPPREQQSKSALP 153
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 410 PPPPGXXXXXFGAPXPXPPXXTPXPRFLG 496
PPPP +G P P PP P P F G
Sbjct: 113 PPPPPHLLHYYGHPPPPPP---PPPPFKG 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,672,078
Number of Sequences: 37544
Number of extensions: 189603
Number of successful extensions: 664
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2764678640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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