BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_F12 (956 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AB007829-1|BAA86201.1| 606|Homo sapiens CSR1 protein. 36 0.29 DQ205185-1|ABA27098.1| 606|Homo sapiens scavenger receptor clas... 33 1.2 BC075068-1|AAH75068.1| 606|Homo sapiens scavenger receptor clas... 33 1.2 BC075067-1|AAH75067.1| 606|Homo sapiens scavenger receptor clas... 33 1.2 >AB007829-1|BAA86201.1| 606|Homo sapiens CSR1 protein. Length = 606 Score = 35.5 bits (78), Expect = 0.29 Identities = 19/64 (29%), Positives = 23/64 (35%) Frame = -2 Query: 601 GPXGGPXVXXFXXGXXPXXWXTXXXPLGXXXPVPPTQKPGARXXXGXXXXGGPKXXPXXP 422 GP G P + P P+G PV P PG + G GGP+ P Sbjct: 481 GPKGDPGILGPLGPQGPQGQPGEAGPVGERGPVGPRGFPGLKGSKGSFGTGGPRGQPGPK 540 Query: 421 GGXG 410 G G Sbjct: 541 GDIG 544 >DQ205185-1|ABA27098.1| 606|Homo sapiens scavenger receptor class A, member 3 protein. Length = 606 Score = 33.5 bits (73), Expect = 1.2 Identities = 19/64 (29%), Positives = 22/64 (34%) Frame = -2 Query: 601 GPXGGPXVXXFXXGXXPXXWXTXXXPLGXXXPVPPTQKPGARXXXGXXXXGGPKXXPXXP 422 GP G P P P+G PV P PG + G GGP+ P Sbjct: 481 GPKGDPGSLGPLGPQGPQGQPGEAGPVGERGPVGPRGFPGLKGSKGSFGTGGPRGQPGPK 540 Query: 421 GGXG 410 G G Sbjct: 541 GDIG 544 >BC075068-1|AAH75068.1| 606|Homo sapiens scavenger receptor class A, member 3 protein. Length = 606 Score = 33.5 bits (73), Expect = 1.2 Identities = 19/64 (29%), Positives = 22/64 (34%) Frame = -2 Query: 601 GPXGGPXVXXFXXGXXPXXWXTXXXPLGXXXPVPPTQKPGARXXXGXXXXGGPKXXPXXP 422 GP G P P P+G PV P PG + G GGP+ P Sbjct: 481 GPKGDPGSLGPLGPQGPQGQPGEAGPVGERGPVGPRGFPGLKGSKGSFGTGGPRGQPGPK 540 Query: 421 GGXG 410 G G Sbjct: 541 GDIG 544 >BC075067-1|AAH75067.1| 606|Homo sapiens scavenger receptor class A, member 3 protein. Length = 606 Score = 33.5 bits (73), Expect = 1.2 Identities = 19/64 (29%), Positives = 22/64 (34%) Frame = -2 Query: 601 GPXGGPXVXXFXXGXXPXXWXTXXXPLGXXXPVPPTQKPGARXXXGXXXXGGPKXXPXXP 422 GP G P P P+G PV P PG + G GGP+ P Sbjct: 481 GPKGDPGSLGPLGPQGPQGQPGEAGPVGERGPVGPRGFPGLKGSKGSFGTGGPRGQPGPK 540 Query: 421 GGXG 410 G G Sbjct: 541 GDIG 544 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 72,643,235 Number of Sequences: 237096 Number of extensions: 1317346 Number of successful extensions: 5626 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2348 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5287 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 12658656216 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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