Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F11
(882 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 33 0.31
SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 31 1.6
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 31 1.6
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 30 2.2
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 30 2.2
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 29 5.0
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_2197| Best HMM Match : Uso1_p115_C (HMM E-Value=7) 29 6.6
SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 28 8.7
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 28 8.7
SB_21673| Best HMM Match : Troponin (HMM E-Value=0.34) 28 8.7
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = +3
Query: 453 VEKNATALREKLQAAVQNTVQESQKLAKKV--------SSNVQETNEKLAPKIKAAYDDF 608
VEK A L+EK Q + V + ++ +K S ++ETN L K ++ +
Sbjct: 561 VEKKAKELKEKYQGELNEKVNKVERTLRKQYEEDIVKGRSELEETNRTLKEKYESEVSEI 620
Query: 609 AKNTQEVIQKIQEAANAKQ 665
++V Q+ QE A+Q
Sbjct: 621 MLQMEQVQQRNQEVFEAQQ 639
>SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069)
Length = 657
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/65 (24%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 456 EKNATALREKLQAAVQNTVQ-ESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVI 632
E+ AL EK + T+Q E +K +K+ + ++ET E + ++++ + + + T+++
Sbjct: 225 EEKLNALLEKEKIVEMTTLQLEDEK--EKIKNELEETKELMQAELESQAETYTEQTRKMH 282
Query: 633 QKIQE 647
++QE
Sbjct: 283 SELQE 287
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 474 LREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIQKI 641
L+E+ ++ + +Q+ +K K+ S Q+T APK K A TQ KI
Sbjct: 340 LKEEYKSLQRQAMQDLKKQLKQTSEAQQQTETNSAPKAKPAKPSVPSPTQTAPNKI 395
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 296 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRK 439
+G+E+ + QL +SLQ L DA +++ L++S +E ++ K
Sbjct: 420 EGTETAIHQLKKENESLQTRLSDAQALSQKQLKESSSRLEEMHQQHNK 467
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 456 EKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQ 623
EKN L E +A+QNT+Q + + E A KI+A + K T+
Sbjct: 272 EKNGIFLSEDSYSAMQNTIQSQTSRITHFETRLPEMEADFAAKIEAMEAELQKVTE 327
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 428 PRPCARCSASTVPKPPWPCRSRLRALPGD 342
P+ RC +S PW C S + AL GD
Sbjct: 821 PKRIPRCESSETRHWPWSCASGIAALVGD 849
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +3
Query: 462 NATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIQKI 641
+ATA +E+L++AV+ + KL K+S+ ET K A Y+ + ++ ++++
Sbjct: 964 DATASKEELESAVEEKAKAETKLKVKISA--LETKLKKAVNETKRYESSSSQLKQQVKEL 1021
Query: 642 Q 644
+
Sbjct: 1022 E 1022
>SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 158 DGATRRSRLLQGHRTPHQGSSIRL*XQQFNSLTKSKDA-QDFSKAWKDGSESVLQQLNAF 334
D + R+ GH H G R+ + N T ++ QDF ++ + S + N
Sbjct: 238 DSESGLERMAIGH---HIGDRGRVVERSLNRRTNEEERKQDFINMDENDAPSFDNEWNHR 294
Query: 335 AKSLQGALGDANGKAKEALEQSRQNIER 418
++ +LGD + ALE+ R+ +R
Sbjct: 295 TRTAMHSLGDVRKDTRRALEEPRKRHDR 322
>SB_2197| Best HMM Match : Uso1_p115_C (HMM E-Value=7)
Length = 272
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = -2
Query: 230 KVLWNXLGVVFDVLEEVGSVASHHRSLGQSDAGEENYELGGHDVLSRD 87
K++ + + +FD +E+ + ++ + ++ + E E+GG + L RD
Sbjct: 115 KIIADQVRTIFDETKEINASSNKPTATTENTSNESEQEVGGSNALPRD 162
>SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 465 ATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIQKIQ 644
A +++ QA + T E+QKL + +++ QETNE + K + +KNTQ+ +
Sbjct: 72 AEKIKQLEQALKEKTHNETQKLDRILATCHQETNEVINSK---SISHESKNTQKRSPTLT 128
Query: 645 EAANAKQ 665
+ KQ
Sbjct: 129 MTEHCKQ 135
>SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 425 RPCARCSASTVPKPPWPCRSRLRALPGD 342
+ C C P PP PC+ R+ LP D
Sbjct: 121 KSCFSCRRRQQPPPPPPCQQRMADLPVD 148
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 471 ALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIQKIQE 647
A+ ++++ V E QKL + +S +E N + KIK +D N + IQ++ +
Sbjct: 214 AVAKQIELLHSAIVSEQQKLEEATTSVTKEVNSFIDTKIK-VLEDVRSNLMDRIQEVYQ 271
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 74 SSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIR 226
S + S S H + RS R P+ + RRSR Q R+P + S R
Sbjct: 214 SRSRSRSRSHRKSRKRSESRSRSRSPKKSRSARRSRSPQKSRSPQRSRSPR 264
>SB_21673| Best HMM Match : Troponin (HMM E-Value=0.34)
Length = 337
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 290 WKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSR 403
++D SES ++N F +G+ D +G K + +SR
Sbjct: 183 YEDNSESNKDEINVFESLREGSTIDESGSEKSSFSESR 220
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,632,792
Number of Sequences: 59808
Number of extensions: 303963
Number of successful extensions: 1067
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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