Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F11
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29095-4|CAA82348.3|  444|Caenorhabditis elegans Hypothetical pr...    33   0.36 
AF038606-4|AAB92026.1|  331|Caenorhabditis elegans Hypothetical ...    31   1.1  
AF038606-3|AAX55701.1|  393|Caenorhabditis elegans Hypothetical ...    31   1.1  
AF038606-2|AAX55700.1|  404|Caenorhabditis elegans Hypothetical ...    31   1.1  
AB182367-3|BAD23998.1|  331|Caenorhabditis elegans hypothetical ...    31   1.1  
AB182367-2|BAD23997.1|  393|Caenorhabditis elegans hypothetical ...    31   1.1  
AB182367-1|BAD23996.1|  404|Caenorhabditis elegans hypothetical ...    31   1.1  
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ...    31   1.4  
AF036699-6|AAB88357.1|  170|Caenorhabditis elegans Hypothetical ...    31   1.4  
Z81146-10|CAB54274.2|  796|Caenorhabditis elegans Hypothetical p...    29   5.8  
Z81146-9|CAB03528.1|  817|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z81121-2|CAB54308.2|  796|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z81121-1|CAB03351.1|  817|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z70308-14|CAB54254.2|  796|Caenorhabditis elegans Hypothetical p...    29   5.8  
Z70308-13|CAA94353.1|  817|Caenorhabditis elegans Hypothetical p...    29   5.8  
AY090019-1|AAM09088.1|  796|Caenorhabditis elegans minibrain kin...    29   5.8  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z29095-4|CAA82348.3|  444|Caenorhabditis elegans Hypothetical
           protein R10E11.5 protein.
          Length = 444

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +3

Query: 486 LQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIQKIQEAAN 656
           LQ A +  VQ   +  K + SNV E  + +   I    DD  K  ++  + ++E  +
Sbjct: 306 LQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDDITKELEKSAKSLEETTD 362


>AF038606-4|AAB92026.1|  331|Caenorhabditis elegans Hypothetical
           protein C04C3.5a protein.
          Length = 331

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 486 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAAYDDFAK 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 154


>AF038606-3|AAX55701.1|  393|Caenorhabditis elegans Hypothetical
           protein C04C3.5c protein.
          Length = 393

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 486 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAAYDDFAK 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 216


>AF038606-2|AAX55700.1|  404|Caenorhabditis elegans Hypothetical
           protein C04C3.5b protein.
          Length = 404

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 486 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAAYDDFAK 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 227


>AB182367-3|BAD23998.1|  331|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 331

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 486 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAAYDDFAK 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 154


>AB182367-2|BAD23997.1|  393|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 393

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 486 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAAYDDFAK 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 216


>AB182367-1|BAD23996.1|  404|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 404

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 486 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAAYDDFAK 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 227


>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
            potassium channelsprotein 2 protein.
          Length = 1564

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = +3

Query: 459  KNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIQK 638
            +N   + +K    VQ   +  QK+ KK + NVQ+  +K A   K      AKN Q++ +K
Sbjct: 1265 ENVQKMCKKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKC----AKNVQKMCKK 1320


>AF036699-6|AAB88357.1|  170|Caenorhabditis elegans Hypothetical
           protein F58F6.3 protein.
          Length = 170

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 446 GGPCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 336
           GG  GA    A C A++ P PP+   S  RA+P   W
Sbjct: 96  GGEGGAKNNRAVCLAASRPPPPYLIYSGRRAMPSAEW 132


>Z81146-10|CAB54274.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 59  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 217
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  GS
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122


>Z81146-9|CAB03528.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 59  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 217
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  GS
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122


>Z81121-2|CAB54308.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 59  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 217
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  GS
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122


>Z81121-1|CAB03351.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 59  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 217
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  GS
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122


>Z70308-14|CAB54254.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 59  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 217
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  GS
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122


>Z70308-13|CAA94353.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 59  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 217
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  GS
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122


>AY090019-1|AAM09088.1|  796|Caenorhabditis elegans minibrain kinase
           2 protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 59  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 217
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  GS
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 446 GGPCGAPRPCARCSASTVPKPP 381
           GG CG P PC   + + V  PP
Sbjct: 65  GGGCGGPAPCGGAAPAYVAPPP 86


>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical protein
            B0464.2 protein.
          Length = 1150

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 513  QESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIQKIQEAANAKQ*ASI 677
            ++  K AKK S   +E  +   P      +   K  +E  +K+QE  +AKQ A I
Sbjct: 977  RKKDKAAKKASRKKRERRDSGGPDSNRRDEKKRKRKEERDRKLQEKLSAKQSAKI 1031


>AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical
           protein F56B3.8 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 137 HRSGPRSDGATRRSRLLQGHRTPHQGSSIRL 229
           HR GP   GAT   R+L+  R P++   I L
Sbjct: 92  HRRGPADQGATYDERILEIRRDPNRTCHIAL 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,456,098
Number of Sequences: 27780
Number of extensions: 220025
Number of successful extensions: 930
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)