Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F09
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0499 - 4166891-4166942,4167191-4167510                           30   2.2  
11_03_0146 + 10744403-10744603,10745199-10745834,10745967-107461...    30   2.9  
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    29   5.2  
05_02_0021 - 5674587-5674799,5674898-5675031,5675129-5675207,567...    29   6.8  
08_02_0287 + 15347145-15349604                                         28   9.0  
04_04_1529 + 34176547-34177215,34177280-34177320,34178777-34179053     28   9.0  

>05_01_0499 - 4166891-4166942,4167191-4167510
          Length = 123

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -1

Query: 459 PLALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASP 322
           PLALR   LL N +     PS SP+   +   R  P P + + ASP
Sbjct: 9   PLALRGASLLGNAVAAAVVPSSSPEQQQQQQRRPRPPPGSKNGASP 54


>11_03_0146 + 10744403-10744603,10745199-10745834,10745967-10746125,
            10746398-10747036,10748018-10748151,10748281-10748464,
            10748882-10749217,10751659-10751945,10752863-10753253,
            10753351-10753615,10753740-10753818,10754123-10754543
          Length = 1243

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = -2

Query: 467  RERPWRSGRGCCCGTN*PCLRRRAAPRSRECGSRSGSARARLHCPERAPAETA 309
            R RP  SGRG   GTN  C    A PR+    +R G +  R  C +   AE A
Sbjct: 1167 RGRPRGSGRGRGRGTNAGCKVSTAVPRTTRRSTREGPSLRR--CLDNEWAEDA 1217


>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -3

Query: 409 CDAELLPEAGNAGPGQAQPV 350
           C A LLPE GN G GQ+  V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505


>05_02_0021 -
           5674587-5674799,5674898-5675031,5675129-5675207,
           5675737-5675799,5676420-5676482,5676557-5676673,
           5676756-5676803,5676918-5677103,5677948-5678047,
           5678323-5678562,5678583-5678686
          Length = 448

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 362 GSARARLHCPERAPAETALSLWRSLKSADPMAL 264
           G A A LH P   P  T+L+ WR  +    + L
Sbjct: 47  GEASAALHAPRLLPPSTSLARWRGARGGGVLDL 79


>08_02_0287 + 15347145-15349604
          Length = 819

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 368 RSGSARARLHCPERAPAETALSLWRSLKSA 279
           RSG   A     ER P + A ++WRSL SA
Sbjct: 673 RSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702


>04_04_1529 + 34176547-34177215,34177280-34177320,34178777-34179053
          Length = 328

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -2

Query: 539 HVVHSAAQRVEVGRVGNGAGRVPDRERPWRSGRG 438
           HV+H     VE G  G G G      RP R  RG
Sbjct: 97  HVIHRIIDAVEEGSGGGGGGGAGPPRRPPRRRRG 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,163,792
Number of Sequences: 37544
Number of extensions: 368887
Number of successful extensions: 1288
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)