Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F08
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0009 - 12132781-12133272                                         28   8.4  
11_01_0514 - 3985204-3985266,3985920-3986061,3986144-3986276,398...    28   8.4  

>11_04_0009 - 12132781-12133272
          Length = 163

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 223 RSSTWAREQRWSCSKPAPERRRRIGSLR 140
           R   W RE+R S  +  P +RRR+G  R
Sbjct: 108 RGEAWRRERRDSKIESRPSQRRRVGGRR 135


>11_01_0514 -
           3985204-3985266,3985920-3986061,3986144-3986276,
           3986703-3986817,3987496-3987549,3987787-3987912,
           3989179-3989319,3989470-3989552,3989643-3989733,
           3990318-3990405,3992705-3992832
          Length = 387

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -2

Query: 158 KDRIFAKFIVSLCKFKRGR*DTSGAVLIT*CALFKNVKSLRDFPRRGAXWK 6
           ++R + KF V + KFK       G + +    + +N   LRDFPR G  WK
Sbjct: 188 EERDYGKFSVKITKFK-----CDGVLELRGLEVQQN--ELRDFPRLGPAWK 231


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,362,826
Number of Sequences: 37544
Number of extensions: 228111
Number of successful extensions: 377
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)