BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_F05 (893 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_01_0162 - 1394980-1395760,1396024-1396037 29 6.6 01_01_0159 + 1380421-1381143 29 6.6 10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.7 10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713... 28 8.7 04_01_0080 - 889548-889892 28 8.7 01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399... 28 8.7 >01_01_0162 - 1394980-1395760,1396024-1396037 Length = 264 Score = 28.7 bits (61), Expect = 6.6 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 5/51 (9%) Frame = +2 Query: 155 RKCPKGEHSVLY-----CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRP 292 R+C +H +LY CP A HD H C CFC P Sbjct: 33 RRCVAVDH-ILYAITVPCPNAAHGCAARTPYHDSHGHAAGCPHAPCFCPEP 82 >01_01_0159 + 1380421-1381143 Length = 240 Score = 28.7 bits (61), Expect = 6.6 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 5/51 (9%) Frame = +2 Query: 155 RKCPKGEHSVLY-----CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRP 292 R+C +H +LY CP A HD H C CFC P Sbjct: 9 RRCVAVDH-ILYAITVPCPNAAHGCAARTPYHDSHGHAAGCPHAPCFCPEP 58 >10_08_0940 - 21708557-21708733,21709058-21709142,21709330-21709551, 21710640-21710815,21711883-21711946,21712433-21712507, 21715114-21715199,21715297-21716715 Length = 767 Score = 28.3 bits (60), Expect = 8.7 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%) Frame = +1 Query: 670 NESAN---ARGEAVCVLGALPLPRSLTRCAR 753 +ESAN AR EAV +G +P+ L RC+R Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464 >10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136, 7131375-7131459,7131609-7131771,7132861-7132937, 7133016-7133160,7133236-7133537,7133615-7133720, 7134781-7134935,7135556-7135712,7135799-7135891, 7136232-7136359,7136439-7136696,7136855-7137145, 7137235-7137318,7138335-7138468,7138557-7138784, 7139778-7139958,7140021-7140108,7140268-7140434, 7140750-7141012,7141117-7141120 Length = 1216 Score = 28.3 bits (60), Expect = 8.7 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +3 Query: 192 ALKWPSRTVRIPKSTISLTTWAHATYHSASATGLMS-GTRKL 314 A P+ +RIP S I W+ Y++ S +G M+ GT L Sbjct: 498 AFSLPNWILRIPYSFIEAVVWSCVVYYTVSVSGNMTVGTNIL 539 >04_01_0080 - 889548-889892 Length = 114 Score = 28.3 bits (60), Expect = 8.7 Identities = 6/20 (30%), Positives = 16/20 (80%) Frame = -1 Query: 362 IDLHNFINIQIPVHICQFSC 303 +D+H+++N+ + + +C+F C Sbjct: 84 VDIHDYLNLALHMQLCRFGC 103 >01_07_0111 - 41137822-41138973,41139453-41139540,41139850-41139969, 41140165-41140211,41140796-41141029,41141305-41141505, 41141506-41143407,41144140-41145303,41145574-41145879 Length = 1737 Score = 28.3 bits (60), Expect = 8.7 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +3 Query: 111 CGSCRLRHRATFSKRENARKVNIQFCIALKW 203 C +RH + E+ARK N++ + L+W Sbjct: 952 CRELEVRHLENVERLEDARKANLRDMVELRW 982 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,966,596 Number of Sequences: 37544 Number of extensions: 396031 Number of successful extensions: 1015 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 992 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1014 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2518669100 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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