Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F05
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M13149-1|AAA52694.1|  525|Homo sapiens HRG protein.                    33   1.8  
BC069574-1|AAH69574.1|  525|Homo sapiens histidine-rich glycopro...    33   1.8  
AB005803-1|BAA21613.1|  525|Homo sapiens histidine-rich glycopro...    33   1.8  
AK091690-1|BAC03721.1|  240|Homo sapiens protein ( Homo sapiens ...    32   3.2  
AB016898-1|BAA78633.1|  254|Homo sapiens HGC6.4 protein.               32   3.2  

>M13149-1|AAA52694.1|  525|Homo sapiens HRG protein.
          Length = 525

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 164 PKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 271
           P G H   + P    P   +P  HDF D+ GPCD P
Sbjct: 386 PHGHHPHGHHPHGHHPHGHHPHCHDFQDY-GPCDPP 420


>BC069574-1|AAH69574.1|  525|Homo sapiens histidine-rich
           glycoprotein protein.
          Length = 525

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 164 PKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 271
           P G H   + P    P   +P  HDF D+ GPCD P
Sbjct: 386 PHGHHPHGHHPHGHHPHGHHPHCHDFQDY-GPCDPP 420


>AB005803-1|BAA21613.1|  525|Homo sapiens histidine-rich
           glycoprotein protein.
          Length = 525

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 164 PKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 271
           P G H   + P    P   +P  HDF D+ GPCD P
Sbjct: 386 PHGHHPHGHHPHGHHPHGHHPHCHDFQDY-GPCDPP 420


>AK091690-1|BAC03721.1|  240|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34371 fis, clone FEBRA2017200. ).
          Length = 240

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = -3

Query: 270 GTSHGPTWSTKSWTSGFSQSGSAI*GQYRTECSPFGHFLVWKML 139
           G   GP W  + WT G         G  R    P G ++ W +L
Sbjct: 61  GAGFGPDWRVRVWTGGAGSKWGCSAGSGRAVLGPNGRWVPWAVL 104


>AB016898-1|BAA78633.1|  254|Homo sapiens HGC6.4 protein.
          Length = 254

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = -3

Query: 270 GTSHGPTWSTKSWTSGFSQSGSAI*GQYRTECSPFGHFLVWKML 139
           G   GP W  + WT G         G  R    P G ++ W +L
Sbjct: 75  GAGFGPDWRVRVWTGGAGSKWGCSAGSGRAVLGPNGRWVPWAVL 118


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,855,525
Number of Sequences: 237096
Number of extensions: 2212652
Number of successful extensions: 6392
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6392
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)