Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F05
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    38   0.010
U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z19152-8|CAA79543.2|   89|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF303272-1|AAG50230.1|   89|Caenorhabditis elegans barrier-to-au...    29   4.5  
Z83232-3|CAE46672.1|  381|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z83232-2|CAB05754.2|  420|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical p...    29   5.9  
Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical pr...    29   5.9  
U39677-1|AAC47961.2|  457|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic catio...    29   5.9  
U07628-1|AAA17738.1|  515|Caenorhabditis elegans APX-1 protein.        28   7.8  
AF101319-2|AAC69353.4|  515|Caenorhabditis elegans Anterior phar...    28   7.8  

>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +2

Query: 167 KGEHSVLYCPQMAEPDC--ENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 340
           +G+  +  C    EP C  ENPE  D V     C    C C +  VR++ TGKCV +++C
Sbjct: 78  EGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGKCVEKNKC 131


>U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical
           protein C53B7.2 protein.
          Length = 195

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 191 CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 340
           C QM  P CE+P     VD    C  P C C  P    + + +C+P + C
Sbjct: 38  CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82


>Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical
           protein M02G9.2 protein.
          Length = 398

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 21/70 (30%), Positives = 28/70 (40%)
 Frame = +2

Query: 149 QTRKCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVP 328
           Q   C  GE     C  M  P+    ++   +    P   P+C C   NVRN  TG  +P
Sbjct: 26  QNCDCTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPPKCVCTEGNVRNIITGPSLP 82

Query: 329 ESEC**NCVN 358
                 NCV+
Sbjct: 83  ALFKPYNCVS 92


>Z19152-8|CAA79543.2|   89|Caenorhabditis elegans Hypothetical
           protein B0464.7 protein.
          Length = 89

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = -3

Query: 309 FVFRTLGRSQKHCGTSHGPTWSTKSWTSGFSQSGSAI*GQYRTECSPFGHFLVWKMLPGD 130
           FV   +G  +  C    GPT+ TK   +GF ++   + GQY         F+ W      
Sbjct: 10  FVGEPMGDKEVTCIAGIGPTYGTKLTDAGFDKA-YVLFGQYLLLKKDEDLFIEWLKETAG 68

Query: 129 VTDSCHNKQQYN 94
           VT + H K  +N
Sbjct: 69  VTAN-HAKTAFN 79


>AF303272-1|AAG50230.1|   89|Caenorhabditis elegans
           barrier-to-autointegration factor protein.
          Length = 89

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = -3

Query: 309 FVFRTLGRSQKHCGTSHGPTWSTKSWTSGFSQSGSAI*GQYRTECSPFGHFLVWKMLPGD 130
           FV   +G  +  C    GPT+ TK   +GF ++   + GQY         F+ W      
Sbjct: 10  FVGEPMGDKEVTCIAGIGPTYGTKLTDAGFDKA-YVLFGQYLLLKKDEDLFIEWLKETAG 68

Query: 129 VTDSCHNKQQYN 94
           VT + H K  +N
Sbjct: 69  VTAN-HAKTAFN 79


>Z83232-3|CAE46672.1|  381|Caenorhabditis elegans Hypothetical
           protein K04B12.2b protein.
          Length = 381

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 69  ENVSNEKFYCIVVCCGSCRLRHRATFS 149
           +N+ +E+F+C+  CC   RL    T++
Sbjct: 196 KNLLDEEFFCLAPCCSGMRLFQAETYT 222


>Z83232-2|CAB05754.2|  420|Caenorhabditis elegans Hypothetical
           protein K04B12.2a protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 69  ENVSNEKFYCIVVCCGSCRLRHRATFS 149
           +N+ +E+F+C+  CC   RL    T++
Sbjct: 235 KNLLDEEFFCLAPCCSGMRLFQAETYT 261


>Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical
           protein F52F12.1a protein.
          Length = 585

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 611 IAFILCFRFRGRCGXVFSALM 673
           I FI+C  F G  G +FS LM
Sbjct: 225 IPFIICMEFMGNSGRIFSGLM 245


>Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical
           protein F52F12.1b protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 611 IAFILCFRFRGRCGXVFSALM 673
           I FI+C  F G  G +FS LM
Sbjct: 208 IPFIICMEFMGNSGRIFSGLM 228


>U39677-1|AAC47961.2|  457|Caenorhabditis elegans Hypothetical
           protein C16E9.2a protein.
          Length = 457

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 258 GPTWSTKSWTS-GFSQSGSAI*GQYRTECSPFGHFLVWKMLP 136
           GPT   K W+  GF+Q    +  + R EC+P   FL +  LP
Sbjct: 388 GPT--NKLWSMRGFAQVWHGLREKKRAECTPLNAFLTYVTLP 427


>AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic cation
           transporter 1 protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 611 IAFILCFRFRGRCGXVFSALM 673
           I FI+C  F G  G +FS LM
Sbjct: 208 IPFIICMEFMGNSGRIFSGLM 228


>U07628-1|AAA17738.1|  515|Caenorhabditis elegans APX-1 protein.
          Length = 515

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +2

Query: 176 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 346
           H V  C    +  DC NP       + G C  P QC C       T+  +C+P + C   
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216

Query: 347 NCVN 358
           +CVN
Sbjct: 217 DCVN 220


>AF101319-2|AAC69353.4|  515|Caenorhabditis elegans Anterior pharynx
           in excess protein1 protein.
          Length = 515

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +2

Query: 176 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 346
           H V  C    +  DC NP       + G C  P QC C       T+  +C+P + C   
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216

Query: 347 NCVN 358
           +CVN
Sbjct: 217 DCVN 220


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,209,177
Number of Sequences: 27780
Number of extensions: 357848
Number of successful extensions: 827
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)