Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F04
(917 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 139 2e-33
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 139 2e-33
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 139 2e-33
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 47 2e-05
11_06_0538 + 24759030-24759379,24759380-24759488,24759604-247596... 29 5.2
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 6.8
12_02_0560 - 20486368-20487159 28 9.0
12_02_0215 - 15794278-15795069 28 9.0
08_02_0206 + 14286721-14287239,14291236-14291466,14291557-14292030 28 9.0
08_01_0551 + 4840926-4841651 28 9.0
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 28 9.0
06_02_0115 - 12016114-12016905 28 9.0
06_01_0167 - 1302685-1302801,1315532-1315960 28 9.0
05_03_0298 - 11944750-11945541 28 9.0
04_01_0292 + 3880298-3881098 28 9.0
04_01_0104 - 1087578-1087702,1088765-1088835,1091542-1092329 28 9.0
03_02_0189 - 6253659-6255380 28 9.0
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 139 bits (337), Expect = 2e-33
Identities = 65/92 (70%), Positives = 79/92 (85%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
A +NCADNTG K + + S K IKGRLNRLP+A GDM++ATVKKGKP+LRKKVMPAV++
Sbjct: 24 ATVNCADNTGAKNLYIISV-KGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIV 82
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRKP+RR+DGV++YFEDNAGVIVN KG +G
Sbjct: 83 RQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKG 114
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1
Query: 418 RGEMKGSAITGPVAKECADLWPRIAS 495
+GEMKGSAITGP+ KECADLWPRIAS
Sbjct: 109 KGEMKGSAITGPIGKECADLWPRIAS 134
Score = 35.1 bits (77), Expect = 0.079
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
AG FR+SLGLPV ++ + G +NLY+I+V+G
Sbjct: 10 AGNKFRMSLGLPVAATVNC-ADNTGAKNLYIISVKG 44
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 139 bits (337), Expect = 2e-33
Identities = 65/92 (70%), Positives = 79/92 (85%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
A +NCADNTG K + + S K IKGRLNRLP+A GDM++ATVKKGKP+LRKKVMPAV++
Sbjct: 24 ATVNCADNTGAKNLYIISV-KGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIV 82
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRKP+RR+DGV++YFEDNAGVIVN KG +G
Sbjct: 83 RQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKG 114
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1
Query: 418 RGEMKGSAITGPVAKECADLWPRIAS 495
+GEMKGSAITGP+ KECADLWPRIAS
Sbjct: 109 KGEMKGSAITGPIGKECADLWPRIAS 134
Score = 35.1 bits (77), Expect = 0.079
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
AG FR+SLGLPV ++ + G +NLY+I+V+G
Sbjct: 10 AGNKFRMSLGLPVAATVNC-ADNTGAKNLYIISVKG 44
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 139 bits (337), Expect = 2e-33
Identities = 65/92 (70%), Positives = 79/92 (85%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
A +NCADNTG K + + S K IKGRLNRLP+A GDM++ATVKKGKP+LRKKVMPAV++
Sbjct: 41 ATVNCADNTGAKNLYIISV-KGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIV 99
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRKP+RR+DGV++YFEDNAGVIVN KG +G
Sbjct: 100 RQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKG 131
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1
Query: 418 RGEMKGSAITGPVAKECADLWPRIAS 495
+GEMKGSAITGP+ KECADLWPRIAS
Sbjct: 126 KGEMKGSAITGPIGKECADLWPRIAS 151
Score = 35.1 bits (77), Expect = 0.079
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
AG FR+SLGLPV ++ + G +NLY+I+V+G
Sbjct: 27 AGNKFRMSLGLPVAATVNC-ADNTGAKNLYIISVKG 61
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +3
Query: 150 QWEAVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---V 320
Q + DN+G K + + KG A GD I+ +VK+ +P + K V
Sbjct: 53 QMRTNLKVVDNSGAKRVMCIQSLRGKKG-------ARLGDTIIGSVKEAQPRGKVKKGDV 105
Query: 321 MPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG 422
+ VV+R R DG I F+DNA V+VNNKG
Sbjct: 106 VYGVVVRAAMKRGRNDGSEIQFDDNAIVLVNNKG 139
>11_06_0538 +
24759030-24759379,24759380-24759488,24759604-24759692,
24760179-24760287,24760370-24760471,24760564-24760628,
24760830-24760936,24761023-24761087,24761163-24761217,
24761305-24761465
Length = 403
Score = 29.1 bits (62), Expect = 5.2
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = -2
Query: 424 RPLLLTMTPALSSKY-INTPSRLLNGFRCLMTT--AGITFFRSSGLPFLTVATIMSPEPA 254
R LLT P + + SRL R L AG+ FF S+ + + I+ P P+
Sbjct: 34 RGFLLTQRPCVEGTMTMGEQSRLPESLRLLDAAFDAGVNFFDSAEMYYYAPLLILPPPPS 93
Query: 253 AGSLFRR-PLIXLDCDHIQISLPPVLSAQLITASHWETQGDTE 128
+ LF+ PL D + L +S++ ET G +E
Sbjct: 94 SFPLFQETPL-----DKLSEGLLCKMSSRYPVPQRSETHGRSE 131
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 404 DTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEFRFTLFDCGHNHV 267
+ I+++ Y+ T +R P P D + +F F L+DC +N V
Sbjct: 101 EINIIIEAYR---TLRDRGPYPADQVVRDINGKFAFVLYDCSNNSV 143
>12_02_0560 - 20486368-20487159
Length = 263
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 100 RAETFLLXQN*ERKKRGKVCK 38
RAET L Q+ E + RGK+CK
Sbjct: 140 RAETVLAAQDREDRNRGKICK 160
>12_02_0215 - 15794278-15795069
Length = 263
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 100 RAETFLLXQN*ERKKRGKVCK 38
RAET L Q+ E + RGK+CK
Sbjct: 140 RAETVLAAQDREDRNRGKICK 160
>08_02_0206 + 14286721-14287239,14291236-14291466,14291557-14292030
Length = 407
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 100 RAETFLLXQN*ERKKRGKVCK 38
RAET L Q+ E + RGK+CK
Sbjct: 283 RAETVLAAQDHEDRNRGKICK 303
>08_01_0551 + 4840926-4841651
Length = 241
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 100 RAETFLLXQN*ERKKRGKVCK 38
RAET L Q+ E + RGK+CK
Sbjct: 119 RAETVLAAQDREDRNRGKICK 139
>08_01_0441 +
3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 100 RAETFLLXQN*ERKKRGKVCK 38
RAET L Q+ E + RGK+CK
Sbjct: 140 RAETVLAAQDREDRNRGKICK 160
>06_02_0115 - 12016114-12016905
Length = 263
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 100 RAETFLLXQN*ERKKRGKVCK 38
RAET L Q+ E + RGK+CK
Sbjct: 140 RAETVLAAQDREDRNRGKICK 160
>06_01_0167 - 1302685-1302801,1315532-1315960
Length = 181
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 100 RAETFLLXQN*ERKKRGKVCK 38
RAET L Q+ E + RGK+CK
Sbjct: 119 RAETVLAAQDREDRNRGKICK 139
>05_03_0298 - 11944750-11945541
Length = 263
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 100 RAETFLLXQN*ERKKRGKVCK 38
RAET L Q+ E + RGK+CK
Sbjct: 140 RAETVLAAQDREDRNRGKICK 160
>04_01_0292 + 3880298-3881098
Length = 266
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 100 RAETFLLXQN*ERKKRGKVCK 38
RAET L Q+ E + RGK+CK
Sbjct: 140 RAETVLAAQDREDRNRGKICK 160
>04_01_0104 - 1087578-1087702,1088765-1088835,1091542-1092329
Length = 327
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 100 RAETFLLXQN*ERKKRGKVCK 38
RAET L Q+ E + RGK+CK
Sbjct: 140 RAETVLAAQDREDRNRGKICK 160
>03_02_0189 - 6253659-6255380
Length = 573
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 152 VGSSNQLRRQHRGQRNLYVIAVQGYQRSPEQTAGGRFRGHDC 277
VG +N+ R++ ++N +I V R E +AGG+ H C
Sbjct: 246 VGGANRSRQEEALKKNKPLIVVGTPGRISEISAGGKLHTHGC 287
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,823,523
Number of Sequences: 37544
Number of extensions: 335064
Number of successful extensions: 895
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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