Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_F04
(917 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 148 2e-35
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 148 3e-35
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 148 3e-35
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 148 3e-35
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 148 3e-35
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 148 3e-35
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 148 3e-35
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 148 3e-35
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 83 2e-15
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 148 bits (359), Expect = 2e-35
Identities = 72/92 (78%), Positives = 80/92 (86%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
AVINCADNTG K + + S K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 24 AVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVRPAVVI 82
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRK +RR+DGVF+YFEDNAGVIVNNKG +G
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKG 114
Score = 58.8 bits (136), Expect = 3e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 343 SGNRSEGVMEYLYTLRTMRVS*SITRGEMKGSAITGPVAKECADLWPRIAS 495
S R +GV Y + V+ +GEMKGSAITGPVAKECADLWPRIAS
Sbjct: 87 SYRRKDGVFLYFEDNAGVIVN---NKGEMKGSAITGPVAKECADLWPRIAS 134
Score = 38.7 bits (86), Expect = 0.029
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
+GA FRISLGLPVG+ + G +NLY+I+V+G
Sbjct: 10 SGAKFRISLGLPVGAVINC-ADNTGAKNLYIISVKG 44
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 148 bits (358), Expect = 3e-35
Identities = 72/92 (78%), Positives = 80/92 (86%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
AVINCADNTG K + + S K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 24 AVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRK +RR+DGVF+YFEDNAGVIVNNKG +G
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKG 114
Score = 58.8 bits (136), Expect = 3e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 343 SGNRSEGVMEYLYTLRTMRVS*SITRGEMKGSAITGPVAKECADLWPRIAS 495
S R +GV Y + V+ +GEMKGSAITGPVAKECADLWPRIAS
Sbjct: 87 SYRRKDGVFLYFEDNAGVIVN---NKGEMKGSAITGPVAKECADLWPRIAS 134
Score = 38.7 bits (86), Expect = 0.029
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
+GA FRISLGLPVG+ + G +NLY+I+V+G
Sbjct: 10 SGAKFRISLGLPVGAVINC-ADNTGAKNLYIISVKG 44
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 148 bits (358), Expect = 3e-35
Identities = 72/92 (78%), Positives = 80/92 (86%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
AVINCADNTG K + + S K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 24 AVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRK +RR+DGVF+YFEDNAGVIVNNKG +G
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKG 114
Score = 58.8 bits (136), Expect = 3e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 343 SGNRSEGVMEYLYTLRTMRVS*SITRGEMKGSAITGPVAKECADLWPRIAS 495
S R +GV Y + V+ +GEMKGSAITGPVAKECADLWPRIAS
Sbjct: 87 SYRRKDGVFLYFEDNAGVIVN---NKGEMKGSAITGPVAKECADLWPRIAS 134
Score = 38.7 bits (86), Expect = 0.029
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
+GA FRISLGLPVG+ + G +NLY+I+V+G
Sbjct: 10 SGAKFRISLGLPVGAVINC-ADNTGAKNLYIISVKG 44
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 148 bits (358), Expect = 3e-35
Identities = 72/92 (78%), Positives = 80/92 (86%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
AVINCADNTG K + + S K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 24 AVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRK +RR+DGVF+YFEDNAGVIVNNKG +G
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKG 114
Score = 58.8 bits (136), Expect = 3e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 343 SGNRSEGVMEYLYTLRTMRVS*SITRGEMKGSAITGPVAKECADLWPRIAS 495
S R +GV Y + V+ +GEMKGSAITGPVAKECADLWPRIAS
Sbjct: 87 SYRRKDGVFLYFEDNAGVIVN---NKGEMKGSAITGPVAKECADLWPRIAS 134
Score = 38.7 bits (86), Expect = 0.029
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
+GA FRISLGLPVG+ + G +NLY+I+V+G
Sbjct: 10 SGAKFRISLGLPVGAVINC-ADNTGAKNLYIISVKG 44
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 148 bits (358), Expect = 3e-35
Identities = 72/92 (78%), Positives = 80/92 (86%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
AVINCADNTG K + + S K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 24 AVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRK +RR+DGVF+YFEDNAGVIVNNKG +G
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKG 114
Score = 58.8 bits (136), Expect = 3e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 343 SGNRSEGVMEYLYTLRTMRVS*SITRGEMKGSAITGPVAKECADLWPRIAS 495
S R +GV Y + V+ +GEMKGSAITGPVAKECADLWPRIAS
Sbjct: 87 SYRRKDGVFLYFEDNAGVIVN---NKGEMKGSAITGPVAKECADLWPRIAS 134
Score = 38.7 bits (86), Expect = 0.029
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
+GA FRISLGLPVG+ + G +NLY+I+V+G
Sbjct: 10 SGAKFRISLGLPVGAVINC-ADNTGAKNLYIISVKG 44
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 148 bits (358), Expect = 3e-35
Identities = 72/92 (78%), Positives = 80/92 (86%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
AVINCADNTG K + + S K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 24 AVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRK +RR+DGVF+YFEDNAGVIVNNKG +G
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKG 114
Score = 58.8 bits (136), Expect = 3e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 343 SGNRSEGVMEYLYTLRTMRVS*SITRGEMKGSAITGPVAKECADLWPRIAS 495
S R +GV Y + V+ +GEMKGSAITGPVAKECADLWPRIAS
Sbjct: 87 SYRRKDGVFLYFEDNAGVIVN---NKGEMKGSAITGPVAKECADLWPRIAS 134
Score = 38.7 bits (86), Expect = 0.029
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
+GA FRISLGLPVG+ + G +NLY+I+V+G
Sbjct: 10 SGAKFRISLGLPVGAVINC-ADNTGAKNLYIISVKG 44
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 148 bits (358), Expect = 3e-35
Identities = 72/92 (78%), Positives = 80/92 (86%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
AVINCADNTG K + + S K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 18 AVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 76
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRK +RR+DGVF+YFEDNAGVIVNNKG +G
Sbjct: 77 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKG 108
Score = 58.8 bits (136), Expect = 3e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 343 SGNRSEGVMEYLYTLRTMRVS*SITRGEMKGSAITGPVAKECADLWPRIAS 495
S R +GV Y + V+ +GEMKGSAITGPVAKECADLWPRIAS
Sbjct: 81 SYRRKDGVFLYFEDNAGVIVN---NKGEMKGSAITGPVAKECADLWPRIAS 128
Score = 38.7 bits (86), Expect = 0.029
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
+GA FRISLGLPVG+ + G +NLY+I+V+G
Sbjct: 4 SGAKFRISLGLPVGAVINC-ADNTGAKNLYIISVKG 38
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 148 bits (358), Expect = 3e-35
Identities = 72/92 (78%), Positives = 80/92 (86%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 338
AVINCADNTG K + + S K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 24 AVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 339 RQRKPFRRRDGVFIYFEDNAGVIVNNKGRNEG 434
RQRK +RR+DGVF+YFEDNAGVIVNNKG +G
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKG 114
Score = 58.8 bits (136), Expect = 3e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 343 SGNRSEGVMEYLYTLRTMRVS*SITRGEMKGSAITGPVAKECADLWPRIAS 495
S R +GV Y + V+ +GEMKGSAITGPVAKECADLWPRIAS
Sbjct: 87 SYRRKDGVFLYFEDNAGVIVN---NKGEMKGSAITGPVAKECADLWPRIAS 134
Score = 38.7 bits (86), Expect = 0.029
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
+GA FRISLGLPVG+ + G +NLY+I+V+G
Sbjct: 10 SGAKFRISLGLPVGAVINC-ADNTGAKNLYIISVKG 44
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 82.6 bits (195), Expect = 2e-15
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +3
Query: 159 AVINCADNTGGKEICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 317
AVINCADNTG K + + S K IKGRLNRLPAAG GDM++ATVKKGKPELRKK
Sbjct: 24 AVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKK 75
Score = 38.7 bits (86), Expect = 0.029
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 116 AGAXFRISLGLPVGSSNQLRRQHRGQRNLYVIAVQG 223
+GA FRISLGLPVG+ + G +NLY+I+V+G
Sbjct: 10 SGAKFRISLGLPVGAVINC-ADNTGAKNLYIISVKG 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,350,648
Number of Sequences: 237096
Number of extensions: 1780748
Number of successful extensions: 3338
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3319
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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