Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F03
         (889 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    25   1.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   4.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   7.4  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   7.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   7.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   7.4  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -3

Query: 506 GNSLIGGIGCGTELQSEVVVSVNDLDIVSGHDESKV*WEVLSN 378
           GN+++ GI   ++L++ ++ S        G+D   + WE  +N
Sbjct: 108 GNAILNGIVASSKLRASLISSCLSFFSQWGYDGIDIDWEYPAN 150


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 751 DXNRTSFSYWXGGRTXAPW 695
           D N  + + W  G+T  PW
Sbjct: 334 DKNAEALAKWANGQTGFPW 352


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 842 RRLHHRVQRPCGLPRRSRSYRAPGI 768
           RR HH V   CG    +    AP +
Sbjct: 257 RRRHHLVHHKCGGEEEAERAPAPAV 281


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 551 SSLPWWENNRVYXKIHNTK 607
           S+ PWWE  +    I NT+
Sbjct: 70  SNRPWWERYQPVSYILNTR 88


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 266 KGKGSIIQNVVNNLIIDKRRNT 331
           KG    I  V+++ ++D R+NT
Sbjct: 153 KGLHGPITRVIDSKVVDSRKNT 174


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 551 SSLPWWENNRVYXKIHNTK 607
           S+ PWWE  +    I NT+
Sbjct: 71  SNRPWWERYQPVSYILNTR 89


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 551 SSLPWWENNRVYXKIHNTK 607
           S+ PWWE  +    I NT+
Sbjct: 71  SNRPWWERYQPVSYILNTR 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,614
Number of Sequences: 336
Number of extensions: 3468
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)