Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F03
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110498-7|CAB57909.2|  302|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z78062-8|CAD56570.2|  299|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z78062-7|CAD56571.2|  270|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z78062-6|CAN99661.1|  274|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL021571-10|CAD56601.2|  299|Caenorhabditis elegans Hypothetical...    29   4.4  
AL021571-9|CAA16511.3|  270|Caenorhabditis elegans Hypothetical ...    29   4.4  
AL021571-8|CAN99720.1|  274|Caenorhabditis elegans Hypothetical ...    29   4.4  

>AL110498-7|CAB57909.2|  302|Caenorhabditis elegans Hypothetical
           protein Y64G10A.1 protein.
          Length = 302

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 125 CACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWN 256
           CA +  A ++LNY RT L+    +NC     P TT + +  A N
Sbjct: 38  CATTCGACSNLNYTRTCLS-DGLKNCACVGEPTTTMLCNTIACN 80


>Z78062-8|CAD56570.2|  299|Caenorhabditis elegans Hypothetical
           protein T19A6.1b protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 621 QVLXYLVLWIXKYTLLFSHQGNELPTDEFQYAXLHHRR 508
           +V  +L++ I K+   F   G  +P   FQY  +HHRR
Sbjct: 20  KVSTWLIMGITKFFQFFIIVGGSIPY-VFQYVEIHHRR 56


>Z78062-7|CAD56571.2|  270|Caenorhabditis elegans Hypothetical
           protein T19A6.1a protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 621 QVLXYLVLWIXKYTLLFSHQGNELPTDEFQYAXLHHRR 508
           +V  +L++ I K+   F   G  +P   FQY  +HHRR
Sbjct: 16  KVSTWLIMGITKFFQFFIIVGGSIPY-VFQYVEIHHRR 52


>Z78062-6|CAN99661.1|  274|Caenorhabditis elegans Hypothetical
           protein T19A6.1c protein.
          Length = 274

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 621 QVLXYLVLWIXKYTLLFSHQGNELPTDEFQYAXLHHRR 508
           +V  +L++ I K+   F   G  +P   FQY  +HHRR
Sbjct: 20  KVSTWLIMGITKFFQFFIIVGGSIPY-VFQYVEIHHRR 56


>AL021571-10|CAD56601.2|  299|Caenorhabditis elegans Hypothetical
           protein T19A6.1b protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 621 QVLXYLVLWIXKYTLLFSHQGNELPTDEFQYAXLHHRR 508
           +V  +L++ I K+   F   G  +P   FQY  +HHRR
Sbjct: 20  KVSTWLIMGITKFFQFFIIVGGSIPY-VFQYVEIHHRR 56


>AL021571-9|CAA16511.3|  270|Caenorhabditis elegans Hypothetical
           protein T19A6.1a protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 621 QVLXYLVLWIXKYTLLFSHQGNELPTDEFQYAXLHHRR 508
           +V  +L++ I K+   F   G  +P   FQY  +HHRR
Sbjct: 16  KVSTWLIMGITKFFQFFIIVGGSIPY-VFQYVEIHHRR 52


>AL021571-8|CAN99720.1|  274|Caenorhabditis elegans Hypothetical
           protein T19A6.1c protein.
          Length = 274

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 621 QVLXYLVLWIXKYTLLFSHQGNELPTDEFQYAXLHHRR 508
           +V  +L++ I K+   F   G  +P   FQY  +HHRR
Sbjct: 20  KVSTWLIMGITKFFQFFIIVGGSIPY-VFQYVEIHHRR 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,696,205
Number of Sequences: 27780
Number of extensions: 341983
Number of successful extensions: 1019
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)