Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F03
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             28   0.13 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    26   0.40 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    25   0.70 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   8.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 137 PPARASLNYPRTLLTKTSRRNCTTASSPATTT 232
           PPA +S + P T+ T T+    TTA++ AT T
Sbjct: 96  PPA-SSTSLPATITTTTTTTTTTTATAAATAT 126


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 585 YTLLFSHQGNELPTDEFQYAXLHHRRRQFSHWRDWLWNRASERGCS 448
           Y+ L SH  N + T++F  +        +    + LW +AS +G S
Sbjct: 265 YSALSSHNLNYVNTEQFVKSQYQANNVHYQGKENILWTQASAKGIS 310


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = -2

Query: 585 YTLLFSHQGNELPTDEFQYAXLHHRRRQFSHWRDWLWNRASERGCS 448
           Y+ + SH  N + T +F          Q+    D LW +AS +  S
Sbjct: 264 YSAMSSHNLNYVNTKQFTQGKFQANDIQYQGASDILWTQASAKAIS 309


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 751 DXNRTSFSYWXGGRTXAPW 695
           D N  + + W  G+T  PW
Sbjct: 338 DKNVEALAKWANGQTGFPW 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,072
Number of Sequences: 438
Number of extensions: 4524
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)