Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F03
         (889 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g69390.1 68414.m07966 chloroplast division protein, putative ...    30   2.4  
At4g24250.1 68417.m03480 seven transmembrane MLO family protein ...    28   7.2  
At4g23250.1 68417.m03352 protein kinase family protein contains ...    28   7.2  

>At1g69390.1 68414.m07966 chloroplast division protein, putative
           (MinE1) identical to chloroplast division protein
           homolog MinE1 GI:17511220 from [Arabidopsis thaliana]
          Length = 229

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 130 MLAASAGVVELSADTSNQDLEEKLYNSILTGDYD 231
           +LA + G  ELS   + Q++E  LYN+I  G +D
Sbjct: 70  VLARNTGDYELSPSPAEQEIESFLYNAINMGFFD 103


>At4g24250.1 68417.m03480 seven transmembrane MLO family protein /
           MLO-like protein 13 (MLO13) identical to membrane
           protein Mlo13 [Arabidopsis thaliana]
           gi|14091596|gb|AAK53806; similar to MLO protein
           SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum
           vulgare][Barley]
          Length = 478

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 513 RRRQFSHWRDWLWNRASERG 454
           R +Q+ HW DW   R S++G
Sbjct: 169 RIQQWKHWEDWFKKRPSQKG 188


>At4g23250.1 68417.m03352 protein kinase family protein contains
           Pfam domain PF00069: Protein kinase domain
          Length = 998

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 742 RTSFSYWXGGRTXAPWCCQRCAR-RIQHXRDCCSGK 638
           +T +++    +  +PW C RC R  + + +  CSGK
Sbjct: 853 QTVYAFVLCSKDISPWNCSRCLRGNVDNYKLSCSGK 888


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,833,250
Number of Sequences: 28952
Number of extensions: 319971
Number of successful extensions: 828
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2081245872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)