BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_F02 (866 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_50682| Best HMM Match : CSD (HMM E-Value=2.1e-38) 54 2e-07 SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04 SB_40039| Best HMM Match : F5_F8_type_C (HMM E-Value=6.2e-12) 30 2.1 SB_23696| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9 SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 6.5 SB_26212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5 SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6 SB_34225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6 SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 28 8.6 >SB_50682| Best HMM Match : CSD (HMM E-Value=2.1e-38) Length = 80 Score = 54.0 bits (124), Expect = 2e-07 Identities = 28/71 (39%), Positives = 43/71 (60%) Frame = +1 Query: 244 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVV 423 ++ + +GTVKWFN + GYGFI + +D+FVH AI + +S+ +G+AV F Sbjct: 12 MSNRQNGTVKWFNDEKGYGFIT-PQSGDDLFVHFKAIQSD----GFKSLKEGQAVTFVAT 66 Query: 424 AGEKGFEAAGV 456 G+KG +A V Sbjct: 67 RGQKGMQAEEV 77 >SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 214 Score = 44.4 bits (100), Expect = 1e-04 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +1 Query: 433 KGFEAAGVTGPGGEPVKGSPYAADKRRGYHR 525 +G EA+ VTGP GEPV+GS YA D+RR +R Sbjct: 13 QGLEASNVTGPDGEPVQGSKYAPDRRRRNNR 43 >SB_40039| Best HMM Match : F5_F8_type_C (HMM E-Value=6.2e-12) Length = 1093 Score = 30.3 bits (65), Expect = 2.1 Identities = 16/50 (32%), Positives = 29/50 (58%) Frame = +3 Query: 537 SFKVADEAVKELHAEED*DVVDPRPTKGVHKEMRVKKEALYHLSAVFSVA 686 +FK E++ ++ ++D + PRP K + +E+R +KE Y +V S A Sbjct: 624 TFKTQKESLATINGDDDVKDLYPRPHKQLGEELRPEKEEHYRPWSVASKA 673 >SB_23696| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 559 Score = 29.1 bits (62), Expect = 4.9 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = +1 Query: 355 ARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG-EPVKGSPYAADKRRG 516 AR +AVR GE +V G G G G GG E V+G+PY ++ G Sbjct: 395 AREYLARAVREGLRGEEGSPSVFLGGGGRGGGGGDGGGGGEGVQGTPYTPEEEEG 449 >SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) Length = 1439 Score = 28.7 bits (61), Expect = 6.5 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +1 Query: 430 EKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFP 537 EK E P EP+ P A++R YHR FP Sbjct: 990 EKAAEKLAAATPSEEPLSHHP-VAEQRSAYHRPEFP 1024 >SB_26212| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 175 Score = 28.7 bits (61), Expect = 6.5 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +3 Query: 474 ASKRLTLCCRQAPWLPP 524 AS T+C RQAPWL P Sbjct: 19 ASPTWTICLRQAPWLSP 35 >SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 833 Score = 28.3 bits (60), Expect = 8.6 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +1 Query: 247 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 342 AEK G V ++K +GFI R D ++F H Sbjct: 201 AEKYQGVVS--SMKESFGFIERADKVSEIFFH 230 >SB_34225| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 607 Score = 28.3 bits (60), Expect = 8.6 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -2 Query: 136 WRTAMVAKMVKDSTTAPRCAPLCGVTSPHLKYE 38 WR +MV V D T C+P PHLK+E Sbjct: 304 WRGSMV---VYDRTVLEPCSPAPATCPPHLKFE 333 >SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) Length = 851 Score = 28.3 bits (60), Expect = 8.6 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -2 Query: 721 PGPPPTASTAKIATEKTALRWYNASFLTLISLCTPL 614 PG PPT T ++ +++A R LT +SL TPL Sbjct: 229 PGTPPTPPTVRLRKKESASR-IPPPLLTTMSLDTPL 263 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,584,104 Number of Sequences: 59808 Number of extensions: 360443 Number of successful extensions: 1068 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1002 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1066 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2479240863 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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