Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_F02
         (866 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.0  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   5.2  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   5.2  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   5.2  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   5.2  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   6.9  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   9.1  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   9.1  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 541 NEGNIGGGSHGAC 503
           NEG  G GSHG C
Sbjct: 349 NEGGTGCGSHGCC 361


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 541 NEGNIGGGSHGAC 503
           NEG  G GSHG C
Sbjct: 349 NEGGTGCGSHGCC 361


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 385 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 471
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 385 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 471
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 385 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 471
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 385 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 471
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 715 PPPTASTAKIATEKTALRWYNASFLT 638
           PPPT +T  + T+ TA     AS  T
Sbjct: 179 PPPTTTTTTVWTDSTATTTTPASTTT 204


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 715 PPPTASTAKIATEKTALRWYNASFLT 638
           PPPT +T  + T+ TA     AS  T
Sbjct: 178 PPPTTTTTTVWTDPTATTTTPASTTT 203


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 715 PPPTASTAKIATEKTALRWYNASFLT 638
           PPPT +T  + T+ TA     AS  T
Sbjct: 178 PPPTTTTTTVWTDPTATTTTPASTTT 203


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,679
Number of Sequences: 2352
Number of extensions: 11835
Number of successful extensions: 40
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)