Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E22
         (958 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07551-1|AAA28464.1|  808|Drosophila melanogaster protein ( Dros...    29   9.4  
L07550-1|AAA28463.1|  701|Drosophila melanogaster protein ( Dros...    29   9.4  
L07549-1|AAA28462.1|  808|Drosophila melanogaster protein ( Dros...    29   9.4  
L06423-1|AAA28543.1|  808|Drosophila melanogaster steroid recept...    29   9.4  

>L07551-1|AAA28464.1|  808|Drosophila melanogaster protein (
           Drosophila melanogastermRNA sequence, complete cds. ).
          Length = 808

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 245 RTPKSFVSGTFPILGKCPSESESAHHNAAXLLXPPT 138
           +T    ++G   I GKC  +S + HH A  L   PT
Sbjct: 171 KTELENIAGEMQIQGKCYPQSNTQHHAATKLKVAPT 206


>L07550-1|AAA28463.1|  701|Drosophila melanogaster protein (
           Drosophila melanogastermRNA sequence, complete cds. ).
          Length = 701

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 245 RTPKSFVSGTFPILGKCPSESESAHHNAAXLLXPPT 138
           +T    ++G   I GKC  +S + HH A  L   PT
Sbjct: 171 KTELENIAGEMQIQGKCYPQSNTQHHAATKLKVAPT 206


>L07549-1|AAA28462.1|  808|Drosophila melanogaster protein (
           Drosophila melanogastermRNA sequence, complete cds. ).
          Length = 808

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 245 RTPKSFVSGTFPILGKCPSESESAHHNAAXLLXPPT 138
           +T    ++G   I GKC  +S + HH A  L   PT
Sbjct: 171 KTELENIAGEMQIQGKCYPQSNTQHHAATKLKVAPT 206


>L06423-1|AAA28543.1|  808|Drosophila melanogaster steroid receptor
           protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 245 RTPKSFVSGTFPILGKCPSESESAHHNAAXLLXPPT 138
           +T    ++G   I GKC  +S + HH A  L   PT
Sbjct: 171 KTELENIAGEMQIQGKCYPQSNTQHHAATKLKLAPT 206


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,776,844
Number of Sequences: 53049
Number of extensions: 227296
Number of successful extensions: 350
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4771654299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)