Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E21
         (900 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.7  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.9  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   9.9  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 183 CTLARQRAKQEXFSSLCIFEEF*ERLHE 100
           C  A+  ++Q  F    + E+F ER HE
Sbjct: 295 CDSAKSESQQTVFLCYKLMEKFPERSHE 322


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 361 IFIKFVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTSQPAYL 227
           IF   +E V      FL ++ GQG FN      N  L T  P ++
Sbjct: 249 IFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNMSLLTVIPIHV 293


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/23 (39%), Positives = 9/23 (39%)
 Frame = +1

Query: 16  CXPTSXPSFHTFGRAPGTASASG 84
           C P   PSF   GR       SG
Sbjct: 55  CVPKPIPSFACIGRCASYIQVSG 77


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 361 SDSTREQWFFQPAKY 405
           S S R +WFFQ  ++
Sbjct: 81  SKSGRNKWFFQKGRF 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,731
Number of Sequences: 336
Number of extensions: 2436
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)