Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E21
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0317 + 24039343-24042717                                         30   2.9  
01_06_1073 - 34300089-34300235,34300783-34301031,34302509-343027...    29   3.8  
07_01_0158 + 1111819-1111972,1113311-1114869                           29   5.0  

>05_05_0317 + 24039343-24042717
          Length = 1124

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = -2

Query: 512 LRVQRPCGLPRRSRSYRAPKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSDFYKIR*SCL 333
           LR+  P      SRS R    S ++R    +RTSF    G+K   +L+L + YK R S +
Sbjct: 509 LRLDDPPNSSSTSRSSRHLSFSCHNR----SRTSFEDFLGFKRARTLLLLNGYKSRTSPI 564

Query: 332 PS 327
           PS
Sbjct: 565 PS 566


>01_06_1073 -
           34300089-34300235,34300783-34301031,34302509-34302780,
           34303131-34303182,34303272-34303349,34303659-34303718,
           34303801-34303875,34304382-34304585,34304694-34304767,
           34304992-34305095,34305261-34305334,34305407-34305473,
           34306024-34306127
          Length = 519

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 233 RWLRSAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYK 358
           RWL    K I ELR  V +      +K    +++  +NE +K
Sbjct: 308 RWLEEHNKHINELRAAVNAHAGDNDLKSTVDSIMAHYNEIFK 349


>07_01_0158 + 1111819-1111972,1113311-1114869
          Length = 570

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 233 RWLRSAKKTIEELREKVESALAPETVKKNFGTMVDSF 343
           RW R     + ++ E V SAL  ETV K    M+D +
Sbjct: 49  RWRRRESYRLLKMGEVVSSALVHETVNKIISGMIDKY 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,521,603
Number of Sequences: 37544
Number of extensions: 283690
Number of successful extensions: 590
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)