BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_E21
(900 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF487535-1|AAL93296.1| 494|Anopheles gambiae cytochrome P450 CY... 27 1.0
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 4.1
AY193727-1|AAO24698.1| 492|Anopheles gambiae cytochrome P450 pr... 25 4.1
U28809-1|AAC47326.1| 140|Anopheles gambiae lysozyme protein. 24 5.5
DQ007317-1|AAY24699.1| 140|Anopheles gambiae lysozyme c-1 protein. 24 5.5
AY028785-1|AAK32959.1| 509|Anopheles gambiae cytochrome P450 pr... 24 7.2
>AF487535-1|AAL93296.1| 494|Anopheles gambiae cytochrome P450
CYP6Z1 protein.
Length = 494
Score = 26.6 bits (56), Expect = 1.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 112 FSKFFKNAQAAEXFLFGSLPRQCACIRQTXMLLK 213
F + KN A + FG+ PR C +RQ +L K
Sbjct: 416 FDEATKNYDADAYYPFGAGPRNCIGLRQGLLLSK 449
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.6 bits (51), Expect = 4.1
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 369 HQGAMVLPAR--QVRKRRPVLHLQPRIQRCLGSSIRS*TP 482
H A LPA QV + +LHLQPR + + + +R P
Sbjct: 576 HGLAKTLPANLGQVTYKTSLLHLQPRQMKLVITELRDDFP 615
>AY193727-1|AAO24698.1| 492|Anopheles gambiae cytochrome P450
protein.
Length = 492
Score = 24.6 bits (51), Expect = 4.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 112 FSKFFKNAQAAEXFLFGSLPRQCACIRQTXMLLK 213
F + KN A + FG+ PR C +RQ + K
Sbjct: 416 FDEATKNYDADAYYPFGAGPRNCIGLRQGVFVSK 449
>U28809-1|AAC47326.1| 140|Anopheles gambiae lysozyme protein.
Length = 140
Score = 24.2 bits (50), Expect = 5.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 419 RTSFSYLAGWKNHCS 375
R F+ GWKNHC+
Sbjct: 115 RHGFNAWYGWKNHCN 129
>DQ007317-1|AAY24699.1| 140|Anopheles gambiae lysozyme c-1 protein.
Length = 140
Score = 24.2 bits (50), Expect = 5.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 419 RTSFSYLAGWKNHCS 375
R F+ GWKNHC+
Sbjct: 115 RHGFNAWYGWKNHCN 129
>AY028785-1|AAK32959.1| 509|Anopheles gambiae cytochrome P450
protein.
Length = 509
Score = 23.8 bits (49), Expect = 7.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 269 LREKVESALAPETVKKNFGTMVDSFNEFYKNL 364
LR+K+ +K+ FGTM+ E +++L
Sbjct: 133 LRQKLTPTFTSGRMKQMFGTMLQVATELHRHL 164
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,633
Number of Sequences: 2352
Number of extensions: 10957
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -