Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E19
         (1173 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075425-1|AAL68241.1| 1234|Drosophila melanogaster LD46584p pro...    30   7.0  
AJ011114-1|CAA09492.1| 1234|Drosophila melanogaster coatomer alp...    30   7.0  
AE014296-317|AAF47535.1| 1234|Drosophila melanogaster CG7961-PB,...    30   7.0  
AE014296-316|AAF47534.1| 1234|Drosophila melanogaster CG7961-PA,...    30   7.0  

>AY075425-1|AAL68241.1| 1234|Drosophila melanogaster LD46584p protein.
          Length = 1234

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 379  FXGXPXITCPXCSFKYXEQFXG 314
            + G P +TCP CS  +  QF G
Sbjct: 1187 YRGKPEVTCPFCSSSFDPQFKG 1208


>AJ011114-1|CAA09492.1| 1234|Drosophila melanogaster coatomer alpha
            subunit protein.
          Length = 1234

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 379  FXGXPXITCPXCSFKYXEQFXG 314
            + G P +TCP CS  +  QF G
Sbjct: 1187 YRGKPEVTCPFCSSSFDPQFKG 1208


>AE014296-317|AAF47535.1| 1234|Drosophila melanogaster CG7961-PB,
            isoform B protein.
          Length = 1234

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 379  FXGXPXITCPXCSFKYXEQFXG 314
            + G P +TCP CS  +  QF G
Sbjct: 1187 YRGKPEVTCPFCSSSFDPQFKG 1208


>AE014296-316|AAF47534.1| 1234|Drosophila melanogaster CG7961-PA,
            isoform A protein.
          Length = 1234

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 379  FXGXPXITCPXCSFKYXEQFXG 314
            + G P +TCP CS  +  QF G
Sbjct: 1187 YRGKPEVTCPFCSSSFDPQFKG 1208


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676,935
Number of Sequences: 53049
Number of extensions: 128249
Number of successful extensions: 80
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6209550816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)