Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_E18
(916 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 68 9e-12
11_02_0011 - 7337618-7338496,7338596-7338991 56 4e-08
01_01_1152 + 9170628-9171899 55 9e-08
11_02_0012 - 7346282-7347136,7347234-7347593 50 2e-06
11_01_0771 + 6453130-6454488 47 2e-05
11_01_0750 - 6315126-6315896,6316371-6316784 47 2e-05
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 45 1e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 44 2e-04
11_01_0767 + 6438648-6438809,6439146-6440000 42 0.001
11_02_0014 - 7352619-7352918,7353173-7353418 39 0.006
05_06_0044 - 25150322-25151260 35 0.078
03_05_0294 + 22855503-22855946,22856346-22856399 34 0.14
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 31 1.7
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 29 5.2
06_01_0059 - 510856-511499,511595-511805 29 5.2
08_02_1482 - 27428208-27428514,27428605-27428906,27431176-274322... 28 9.0
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423... 28 9.0
01_06_1260 - 35820781-35821161,35821163-35821420,35821524-35821976 28 9.0
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 68.1 bits (159), Expect = 9e-12
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Frame = +1
Query: 244 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG--GGEAQESTHTYGLLNQRYAEFDP 417
DKN+ SPL + L+L +GA ++ ++I LG GG A + ++ L + P
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 418 ------KFLTVANKIYVSDQYKLADAFSRT-ANLFRSEVDNINFSAP-KNAADIINRWAD 573
+ AN ++V +L A++R A+ +R+E ++F + A IN W +
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 574 EQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEE 708
T G IK + +D +D AT + N ++F+G W F+A T +
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSD 195
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 56.0 bits (129), Expect = 4e-08
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Frame = +1
Query: 235 LADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHT---YGLLNQ 396
++ +KN++ SP + L+L +GA + +E+ +LG + +ES GL ++
Sbjct: 27 VSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADE 86
Query: 397 RYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSA-PKNAADIINRWA 570
A P+ ++ A ++ + +L A+ + A +++ NF PK + IN+W
Sbjct: 87 S-ASGGPR-VSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWV 144
Query: 571 DEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETE-------EKDSTSMK 729
+ T I + + + TA+ + N I+F+G W PF S T + S +
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVP 204
Query: 730 KRSSRNRQCVSYSHCFTL 783
SSR Q + + FT+
Sbjct: 205 FMSSREDQYIGFHDGFTV 222
>01_01_1152 + 9170628-9171899
Length = 423
Score = 54.8 bits (126), Expect = 9e-08
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGG---GEAQESTHTYGLLNQRYAEFDP 417
+N I SPL L+L GA +++ E+ LG E S T + R+ P
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHL---P 115
Query: 418 KFLTVANKIYVSDQYKLADAFS-RTANLFRSEVDNINFSA-PKNAADIINRWADEQTQGH 591
+ A ++V L F+ A+ + + + +F+ P+ A + +N + + T+G
Sbjct: 116 N-TSFACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGL 174
Query: 592 IKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 702
I+ + + +D +T V + N + F+G W +PF+ S T
Sbjct: 175 IRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSAT 211
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 50.4 bits (115), Expect = 2e-06
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Frame = +1
Query: 217 LKESYNLADD-----KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQEST 372
L+ + LADD +NV+ SP+ + L+L SGA + +E+ +LG + +ES
Sbjct: 16 LRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEESV 75
Query: 373 HT---YGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINFSAPKN 543
GL ++ +E ++ A ++ ++ L A+ R A+ R PK+
Sbjct: 76 RRAVEVGLADE--SESGGPRVSYACGVWHDERLALKPAY-RAADFQRQ---------PKS 123
Query: 544 AADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 702
+ IN+W + T I+ + + + TA+ + N I+F+G W PF T
Sbjct: 124 SRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERT 176
>11_01_0771 + 6453130-6454488
Length = 452
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +1
Query: 556 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEK 711
IN WA T I + + P TAV + N I+F+G W PFN S+TE K
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERK 228
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQE 366
+N+ SPL V LSL +GA + +EI +LG +
Sbjct: 37 RNLAFSPLSVHAALSLAAAGAAGGTLDEILAVLGAASRDD 76
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 47.2 bits (107), Expect = 2e-05
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Frame = +1
Query: 250 NVIASPLGVMLLLSLYESGAGAQSKEEIREILG------GGEAQE----STHTYGLLNQR 399
N S V + L+L GA ++ ++ + LG GG A S +L R
Sbjct: 33 NAAVSAPAVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDR 92
Query: 400 YAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADIINRWAD 573
P+ L A ++ L+ F A N++ S +F + P++A D IN W
Sbjct: 93 STSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVK 151
Query: 574 EQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 675
+ T+G + T + ID T + + + ++F+G W
Sbjct: 152 DSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 44.8 bits (101), Expect = 1e-04
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +1
Query: 547 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDSTSM 726
A +N W ++ T G IK + +D T + + N ++F+G W F+AS+T++ + +
Sbjct: 214 ASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLL 273
Query: 727 KKRSSRNRQCVSYSHCFTLKTKNWAQR*SXLPYKEPG----FRMVVVLPD 864
+S + + + L N + LPY++ G F M ++LP+
Sbjct: 274 DGKSVQAPFMSTSKKQYILSYDN--LKVLKLPYQQGGDKRQFSMYILLPE 321
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 556 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEE 708
+N W D T G IK + I+ T + + N ++F+G W F+ S+TE+
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTED 519
Score = 38.3 bits (85), Expect = 0.008
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYG------LLNQRYAE 408
+NV SPL + + LSL +GAG +++++ LGG + E H + +L
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGA 94
Query: 409 FDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSA-----PKNAADI 555
P+ + A+ ++V L F A +++E +++F P N A+I
Sbjct: 95 GGPR-VAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDFQTKWLLLPSNLANI 148
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 547 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEE 708
A +N W D T G IK + +D T + + N ++F+G W F+AS+T++
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKD 59
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 41.5 bits (93), Expect = 0.001
Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 15/155 (9%)
Frame = +1
Query: 445 YVSDQYKLADAF-SRTANLFRSEVDNINF-SAPKNAADIINRWADEQTQGHIKTPVSEDK 618
++ Y L A+ ++ ++F + P A IN W T+ I + +
Sbjct: 23 WLDASYSLKPAYRDAIVGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPES 82
Query: 619 IDPATAVAMFNVIFFQGHWHVPFNASETEEKDSTSMKKRSSR----NRQCVSYSH--C-- 774
T + N I+F+G W PF+ S+T E++ + S R SY H C
Sbjct: 83 QSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHD 142
Query: 775 ----FTLKTKNWAQR*S-XLPYKEPGFRMVVVLPD 864
L K + + L Y P F M+V LPD
Sbjct: 143 GFRVLRLPYKATSDTYNLKLRYSLPSFAMLVFLPD 177
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +1
Query: 535 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET---- 702
PK + IN W + T I + + + T + + N I+F+G W PF T
Sbjct: 83 PKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGK 142
Query: 703 -EEKDSTSMKKRSSRNRQ 753
D +S+ R R+R+
Sbjct: 143 FHRLDGSSVNVRFMRSRE 160
>05_06_0044 - 25150322-25151260
Length = 312
Score = 35.1 bits (77), Expect = 0.078
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Frame = +1
Query: 442 IYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSEDK 618
++V +L AF+ TA ++F++ V + A A IN W QT G +K +S
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRSAGNPAAARAE--INEWFSSQTGGFVKDILSNSI 60
Query: 619 IDP-----------ATAVAMFNVIFFQGHWHVPFNASETEEKD 714
D + +V + N ++F +W PF TEE D
Sbjct: 61 DDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGD 103
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Frame = +1
Query: 238 ADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG--GGEAQESTHTYG--LLNQRYA 405
A NV SPL + + LSL +GAG +++++ +LG G E H + ++ A
Sbjct: 41 AGGSNVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLA 100
Query: 406 EFDP---KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF 528
+ P + A+ +++ L +F A +++E +++F
Sbjct: 101 DSSPAGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF 145
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 367 TLEPPLPQGFPLSLPWTVHRLQTRTRKAAAS 275
+L PPLP G PLS P+ QT + A S
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEKAAPLS 781
>08_02_1508 +
27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 29.1 bits (62), Expect = 5.2
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 548 LISSTVGRTNRL--KDT*RLLSAKTKLTPPRPLQCLTSFSSRGTGTFRSTQVKQKKKIPR 721
L ++VG T RL + T S + PP TSFSS+ S ++Q K PR
Sbjct: 237 LPQTSVGHTIRLDPRQTTSTESRTVLVPPPSAGMISTSFSSQREQPLPSETIRQDKPSPR 296
Query: 722 R*KNDHQETDNASLT 766
+ N T+ T
Sbjct: 297 KESNFFTTTEKTPST 311
>06_01_0059 - 510856-511499,511595-511805
Length = 284
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 277 MLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAEFD-PKFLTVANKIYVS 453
+LL + GAG S ++ GGG ++ H +G+ Q +A D LTV Y +
Sbjct: 197 LLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYST 256
Query: 454 DQYKL--ADAFS 483
Q + +DA S
Sbjct: 257 PQQTIIVSDAIS 268
>08_02_1482 -
27428208-27428514,27428605-27428906,27431176-27432228,
27432305-27432421,27432510-27432843,27433064-27433188,
27433408-27433475,27433555-27433636,27433753-27433866,
27433942-27434042,27434145-27434234,27434615-27434819
Length = 965
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 661 FQGHWHVPFNASETEEKDSTSMKKRSSRNRQCVSYSHC 774
F WH P + S ++ +S M + +SR VS HC
Sbjct: 480 FMSPWHPPSHHSSSDCIESYHMTEAASRTASEVSEEHC 517
>01_06_1263 +
35840502-35841308,35841763-35841969,35842272-35842370,
35843361-35843464,35844521-35844698,35844774-35845244,
35845383-35845523,35846290-35846349,35846427-35846490,
35847295-35847524,35847606-35847704
Length = 819
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +2
Query: 338 KSLGEGRLKSQHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWT 517
K+ +G L +++ + + + +N T + S K P S S RSP +R S +
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434
Query: 518 TLTSALRRMPLISSTVGRTN 577
++ LIS +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454
>01_06_1260 - 35820781-35821161,35821163-35821420,35821524-35821976
Length = 363
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 623 TPPRPLQCLTSFSSRGTGTF-----RSTQVKQKKKIPRR*KNDHQETDNASLTVIV 775
+PPRPL S G+G F R + ++K++I R HQ N +TV +
Sbjct: 157 SPPRPLPSGESCGQDGSGPFSQKVGRYSAEERKERIERYRVKRHQRNFNKKITVTI 212
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,639,168
Number of Sequences: 37544
Number of extensions: 535117
Number of successful extensions: 1578
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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