Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E16
         (1089 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...    56   2e-06
UniRef50_Q9LA62 Cluster: ORF-401-like protein; n=1; Prophage P-E...    34   7.4  
UniRef50_Q4E1P2 Cluster: Putative uncharacterized protein; n=1; ...    34   7.4  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score = 55.6 bits (128), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 36/56 (64%)
 Frame = +1

Query: 622 HPEXXXKXATALRKKLQAAVQNTVQESQKXXXKVSSNVQEIXXKXAPXIKAAXXXF 789
           HP+   K A A + KLQAAVQ TVQESQK   +V+SN++E   K AP IK A   F
Sbjct: 117 HPDVE-KEANAFKDKLQAAVQTTVQESQKLAKEVASNMEETNKKLAPKIKQAYDDF 171


>UniRef50_Q9LA62 Cluster: ORF-401-like protein; n=1; Prophage
           P-EibA|Rep: ORF-401-like protein - Prophage P-EibA
          Length = 479

 Score = 33.9 bits (74), Expect = 7.4
 Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = +1

Query: 160 GPKVXVSSXFSALAIRLLGPKGKPNGVGERRNAXP-GTFFQRGTIRKQPXNPKGSSQLK- 333
           GP+    +   A A   +GPKG+P   GER    P G    +G     P  PKG +  + 
Sbjct: 145 GPQGATGAKGPAGATGAVGPKGEPGPKGERGETGPQGPKGDKGD-PGGPPGPKGDTGPRG 203

Query: 334 ELLRNKQGFKPSG-LQPKGSKGTP 402
           E     QG  P+G   PKG KG P
Sbjct: 204 EAGPRPQG--PAGQTGPKGDKGEP 225


>UniRef50_Q4E1P2 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 707

 Score = 33.9 bits (74), Expect = 7.4
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
 Frame = +1

Query: 208 LLGPKGKPNGVGERRNAXPGTFFQRGTI----RKQPXNPKGSSQLKELLRNKQG---FKP 366
           +L    +PNGVG    A       + TI     + P NP  S++L  ++R ++G   +  
Sbjct: 589 ILSHSNRPNGVGNSNEAGNNAHKPKRTIVRVVSQNPPNPPSSNELPPVVRIRKGPNSYSL 648

Query: 367 SGLQPKGS 390
           + LQPKG+
Sbjct: 649 AELQPKGT 656


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,240,715
Number of Sequences: 1657284
Number of extensions: 13223695
Number of successful extensions: 26564
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26533
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 105714451180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)