Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E16
         (1089 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0777 + 25110356-25110662,25112569-25112789,25112880-251131...    29   8.5  

>01_05_0777 +
           25110356-25110662,25112569-25112789,25112880-25113127,
           25113274-25113664,25113751-25114155,25115260-25115366,
           25115833-25116170,25116206-25116486,25116645-25116889,
           25116998-25117382,25117459-25117884
          Length = 1117

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +3

Query: 222 REAEWGWRTPERLPRNFFSKGNXSKTTQXPKGKFPIKGTFKKQTR 356
           R  EW W  P RL R   ++G      + P G  P+      + R
Sbjct: 32  RAMEWAWWRPRRLERALRAQGLRGTPYRSPAGDAPLNVQLSAEAR 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,528,748
Number of Sequences: 37544
Number of extensions: 383798
Number of successful extensions: 810
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3257937684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)