Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_E15
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0465 + 3640736-3640817,3640898-3641088,3641266-3641789,364...    33   0.32 
02_01_0521 + 3768072-3768239,3768280-3768337,3769197-3769659,376...    30   2.2  
09_01_0142 - 2103224-2103864,2104264-2104399                           29   3.9  
09_04_0188 - 15410310-15410514,15410597-15410748,15410845-154110...    29   6.8  
11_06_0202 - 21184217-21184503,21184622-21184982                       28   9.0  
03_03_0236 - 15696495-15696977,15697290-15697339,15699867-15699906     28   9.0  

>12_01_0465 +
           3640736-3640817,3640898-3641088,3641266-3641789,
           3643726-3644029
          Length = 366

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 606 ILKYTLLFSHQGNELPTDEVQYACLHHRRRQFSHSRGL 493
           ILK    F+  G  +P D+    CL+ R+R+F H+ GL
Sbjct: 179 ILKKPYDFNPDGRIVPADKPSQTCLNKRQREFLHALGL 216


>02_01_0521 +
           3768072-3768239,3768280-3768337,3769197-3769659,
           3769736-3769990,3770763-3770934,3772260-3772910,
           3773659-3774045,3774123-3774155,3774239-3774307,
           3774388-3774463,3775135-3775223,3775442-3775615,
           3775693-3775821
          Length = 907

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = +2

Query: 137 IARRQRGRSLNYPRTLLTKNSRRNCTTASSPANYDSAVRQS---LEYEKPRQGLHHPECS 307
           I    RG+  ++P    T+  RR  T A +P N +     S   L  E  R+ +HH  C+
Sbjct: 479 ICSESRGKRGDWPNMKATRRGRRR-THALTPDNEEEEENLSELELAVENTRRRIHHCNCN 537

Query: 308 *QPDH 322
             P H
Sbjct: 538 HIPRH 542


>09_01_0142 - 2103224-2103864,2104264-2104399
          Length = 258

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 370 RQRTGNC*KVLPIKL*THHGRK-LCQD-HLQKLQPRSEARFHNQSPRMRE 513
           RQ T +  K  P++   +HGR  + +D H   L P S A+ HNQ P  R+
Sbjct: 36  RQLTRHLIKYAPVQ--ANHGRSNIARDVHKSLLVPVSAAKVHNQKPAPRD 83


>09_04_0188 -
           15410310-15410514,15410597-15410748,15410845-15411003,
           15411062-15411367,15412508-15412535,15413174-15413290,
           15413649-15413717,15413919-15414103
          Length = 406

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 603 LKYTLLFSHQGNELPTDEVQYACLHHRRRQFSHSRGLVVEP 481
           L +TL  + +G    ++E+     HHR R+ SH  G++  P
Sbjct: 127 LNHTLFQTRKGGPQESEELGEDIRHHRLRRRSHGHGVLQGP 167


>11_06_0202 - 21184217-21184503,21184622-21184982
          Length = 215

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 200 SSSWLEVSADSSTNARAGGEQC 135
           SS+WL   A ++++A AGGE C
Sbjct: 20  SSAWLPSPASAASDAAAGGEYC 41


>03_03_0236 - 15696495-15696977,15697290-15697339,15699867-15699906
          Length = 190

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 621 YLVLWILKYTLLFSHQGNELPTDEVQYACLHHRRRQFSHSRGLV 490
           Y++  ++    LFS QG  LP D+   + +  RR   SH  G+V
Sbjct: 20  YVLERVVAQFYLFSSQGRPLPDDDGITSEMQIRRYLLSHGNGVV 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,007,136
Number of Sequences: 37544
Number of extensions: 435379
Number of successful extensions: 1161
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)