Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_E14
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 32 0.58
09_02_0603 - 11150739-11150746,11150791-11151340 31 1.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 2.3
05_03_0665 - 16774043-16774522 30 2.3
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 3.1
01_01_0046 - 331758-332627 29 3.1
09_02_0495 + 9880714-9881196 29 4.1
03_01_0023 + 198414-198968 29 5.4
10_08_0826 - 20840445-20840504,20840692-20840778,20841344-20841706 28 7.1
01_06_1377 + 36764461-36765339 28 7.1
08_01_0059 - 394001-394708 28 9.4
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 9.4
07_01_0479 + 3606663-3607448 28 9.4
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 28 9.4
02_02_0076 + 6581428-6581695,6582247-6582305,6582481-6582531,658... 28 9.4
02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108 28 9.4
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 28 9.4
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 527 PPXXXFFFXXPPPPXXXFFXPPP 459
PP F PPPP FF PPP
Sbjct: 48 PPVIRVFAAAPPPPRAAFFAPPP 70
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 552 PPXXXGGXTPXXXXFFFXPPPPXXXXFXPPPXXXXXXPPXXG 427
PP G F F PPPP F P P PP G
Sbjct: 27 PPRLEKGNFALPPPFGFPPPPPPGSTFVPLPQSGVPPPPPLG 68
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 7/46 (15%)
Frame = -3
Query: 551 PXPXGGXXPPXXXFFFXX-------PPPPXXXFFXPPPXXXXXXPP 435
P P G PP F PPPP FF PPP PP
Sbjct: 38 PPPFGFPPPPPPGSTFVPLPQSGVPPPPPLGSFFVPPPQSRVPPPP 83
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 567 FFXXLPPXXXGGXTPXXXXFFFXPPPPXXXXFXPPPXXXXXXPP 436
F PP G P F F P PP PPP PP
Sbjct: 51 FLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPP 94
>05_03_0665 - 16774043-16774522
Length = 159
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 376 PXLPPPKKXGXFXXXXXPPPGGXXXXXXGGGXKXXXXGGGG 498
P LPPP + PPP G GGG GGGG
Sbjct: 73 PPLPPPPRLAL------PPPPGRRDGYLGGGGAGGGGGGGG 107
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -3
Query: 551 PXPXGGXXPPXXXFFFXXPPPPXXXFFXPPPXXXXXXPP 435
P P PP PPPP PPP PP
Sbjct: 439 PPPYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQYAPP 477
>01_01_0046 - 331758-332627
Length = 289
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 287 PFXXFFXFWXXPPPPPGXXXRGXVKKKKXXPXSPPQKR 400
P +F +W PPPPP + P SPP R
Sbjct: 10 PQRYWFPYWTSPPPPP-PPPPPPPSSSRYRPPSPPSSR 46
>09_02_0495 + 9880714-9881196
Length = 160
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Frame = +1
Query: 376 PXLPPPKKXGXFXXXXXPPPGGXXXXXXGGGXKXXXXG--GG--GXKKKXXXXGGXXPPX 543
P LPPP G PPP G GG G GG G PP
Sbjct: 36 PCLPPPIAGGAVNSYPPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPPPPGVMPGAFAPPF 95
Query: 544 GXG 552
G G
Sbjct: 96 GGG 98
>03_01_0023 + 198414-198968
Length = 184
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 427 PPPGGXXXXXXGGGXKXXXXGGGGXKKKXXXXGGXXPPXGXG 552
P PGG GGG GGGG GG G G
Sbjct: 33 PSPGGGGGGGGGGGGGGGGRGGGGGSGGGSGGGGGSGGGGSG 74
>10_08_0826 - 20840445-20840504,20840692-20840778,20841344-20841706
Length = 169
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 308 FWXXPPPPPGXXXRGXVKKKKXXPXSPPQKR 400
FW PPPPP + + P PPQKR
Sbjct: 96 FWRPPPPPP-------TTQPQPQPQQPPQKR 119
>01_06_1377 + 36764461-36765339
Length = 292
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -2
Query: 552 PPXXXGGXTPXXXXFFFXPPPPXXXXFXPPP 460
PP P ++F PPPP PPP
Sbjct: 156 PPPEPQYPPPSSSPYYFPPPPPPAYSAPPPP 186
>08_01_0059 - 394001-394708
Length = 235
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 551 PXPXGGXXPPXXXFFFXXPPPPXXXFFXPPPXXXXXXPP 435
P P PP PPPP + PPP PP
Sbjct: 17 PPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPP 55
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 320 PPPPPGXXXRGXVKKKKXXPXSPPQK 397
PPPPPG R V + P PP +
Sbjct: 254 PPPPPGPPPREIVPGQTLLPPPPPPR 279
>07_01_0479 + 3606663-3607448
Length = 261
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 320 PPPPPGXXXRGXVKKKKXXPXSPPQKRXG 406
PPPPPG RG P PPQ R G
Sbjct: 201 PPPPPGPFMRG------PPPMGPPQVRPG 223
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 320 PPPPPGXXXRGXVKKKKXXPXSPPQKR 400
PPPPP V+K P PP+KR
Sbjct: 328 PPPPPPFLPPFPVEKVTVNPVVPPEKR 354
>02_02_0076 +
6581428-6581695,6582247-6582305,6582481-6582531,
6582766-6582898,6583533-6583618,6583955-6584008,
6584576-6584645,6585198-6585259,6585370-6585457,
6585645-6585728,6585820-6586028
Length = 387
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 323 PPPPGXXXRGXVKKKKXXPXSPPQKR 400
PPPP RG V + P PP +R
Sbjct: 2 PPPPPSKNRGHVPAPRPPPGKPPGRR 27
>02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108
Length = 139
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 382 LPPPKKXGXFXXXXXPPPGGXXXXXXGGGXKXXXXGGGG 498
L PP F PP G GGG GGGG
Sbjct: 34 LSPPPPPPFFPPQWAPPVAGGGGPFAGGGGYGSGAGGGG 72
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 507 FFXPPPPXXXXFXPPPXXXXXXPPXXG 427
F PPPP PPP PP G
Sbjct: 409 FVQPPPPPTHTHGPPPPPPPPPPPPVG 435
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,384,292
Number of Sequences: 37544
Number of extensions: 352370
Number of successful extensions: 2050
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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